RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 TFCP2Q12800 502 aa17.69■□□□□ 0.42
SEMA4D-222ENST00000540183 CCDC84Q86UT8 332 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-222ENST00000540183 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
SEMA4D-222ENST00000540183 IDI2Q9BXS1 227 aa17.69■□□□□ 0.42
SEMA4D-222ENST00000540183 A0A1B0GUL7 405 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 FMNL1O95466 1100 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 BTDP43251 543 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 PICALMQ13492 652 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 DZIP1Q86YF9 867 aaKnown RBP17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 ZSCAN29Q8IWY8 852 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 SCYL3Q8IZE3 742 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 XAGE2Q96GT9 111 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
SEMA4D-222ENST00000540183 TRIOBPQ9H2D6 2365 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 ENTPD3O75355 529 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 GNRH1P01148 92 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 BCRP11274 1271 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 PTPRAP18433 802 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 PRMT2P55345 433 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 PI16Q6UXB8 463 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 GADL1Q6ZQY3 521 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 GABRQQ9UN88 632 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 ZHX2Q9Y6X8 837 aa17.67■□□□□ 0.42
SEMA4D-222ENST00000540183 LOC285556D6RIA3 1793 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 FAM196BA6NMK8 535 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 CXCL11O14625 94 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 SRGAP3O43295 1099 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 PRKCZQ05513 592 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 RAET1EQ8TD07 263 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 PARK7Q99497 189 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 COLQQ9Y215 455 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 AFG3L2Q9Y4W6 797 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
SEMA4D-222ENST00000540183 A0A0G2JLL6 359 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 H0YGN5 161 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 GRK4P32298 578 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 RHBDL3P58872 404 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 MECOMQ03112 1051 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 PRRT2Q7Z6L0 340 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 PICK1Q9NRD5 415 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 FOCADQ5VW36 1801 aa17.65■□□□□ 0.42
SEMA4D-222ENST00000540183 ALPK3Q96L96 1907 aa17.64■□□□□ 0.42
SEMA4D-222ENST00000540183 ZBTB22O15209 634 aa17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 FXR1P51114 621 aaKnown RBP eCLIP17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 FAM163AQ96GL9 167 aaPredicted RBP17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 NEUROD6Q96NK8 337 aa17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 HMG20BQ9P0W2 317 aa17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 PDS5AQ29RF7 1337 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-222ENST00000540183 MAST2Q6P0Q8 1798 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 TRIM75PA6NK02 468 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 CCL5P13501 91 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 HOXD10P28358 340 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 FCGRTP55899 365 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 ERICH6Q7L0X2 663 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
SEMA4D-222ENST00000540183 GPR75-ASB3A0A0A6YYF3 556 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 PNMA6EA0A0J9YXQ4 647 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 GNAI3P08754 354 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 MTX1Q13505 466 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 SPTY2D1Q68D10 685 aaPredicted RBP17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 BIN2Q9UBW5 565 aaPredicted RBP17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
SEMA4D-222ENST00000540183 SZT2Q5T011 3432 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 BCAR3O75815 825 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 ELNP15502 786 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 RRP1BQ14684 758 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 TREML2Q5T2D2 321 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 FASTKD5Q7L8L6 764 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 SLF2Q8IX21 1173 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 ARHGAP45Q92619 1136 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 UNC93B1Q9H1C4 597 aa17.61■□□□□ 0.41
SEMA4D-222ENST00000540183 CTNND1O60716 968 aaKnown RBP17.6■□□□□ 0.41
SEMA4D-222ENST00000540183 TRIM27P14373 513 aa17.6■□□□□ 0.41
SEMA4D-222ENST00000540183 SPATA5Q8NB90 893 aa17.6■□□□□ 0.41
SEMA4D-222ENST00000540183 CLUAP1Q96AJ1 413 aa17.6■□□□□ 0.41
SEMA4D-222ENST00000540183 GJB1P08034 283 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 MCAMP43121 646 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 GJA8P48165 433 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 UBE2Q1Q7Z7E8 422 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 DPF3Q92784 378 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 FRAT1Q92837 279 aaPredicted RBP17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 RAI14Q9P0K7 980 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 RANBP2P49792 3224 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 MYH1P12882 1939 aa17.59■□□□□ 0.41
SEMA4D-222ENST00000540183 ADCY3O60266 1144 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 ARID4AP29374 1257 aaPredicted RBP17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 FLT3LGP49771 235 aa17.58■□□□□ 0.4
SEMA4D-222ENST00000540183 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms