RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	TEX11	Q8IYF3	940 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	VPS52	Q8N1B4	723 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IP6K1	Q92551	441 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GNA14	O95837	355 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CHML	P26374	656 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GBP1	P32455	592 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCDC122	Q5T0U0	273 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	STMN2	Q93045	179 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IFNK	Q9P0W0	207 aa		10.06	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZBED4	O75132	1171 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ITIH3	Q06033	890 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	WDR66	Q8TBY9	1149 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LRRC59	Q96AG4	307 aa	Known RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BICC1	Q9H694	974 aa	Known RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TFCP2L1	Q9NZI6	479 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MROH5	Q6ZUA9	1318 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PDE8A	O60658	829 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MCM6	Q14566	821 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IFT81	Q8WYA0	676 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RSRC1	Q96IZ7	334 aa	Known RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SBNO1	A3KN83	1393 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MBD4	O95243	580 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CAPN2	P17655	700 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ADCY7	P51828	1080 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GTF2A1	P52655	376 aa	Predicted RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PDE4D	Q08499	809 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MTMR3	Q13615	1198 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IFT20	Q8IY31	132 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	VPS18	Q9P253	973 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	HOXC9	P31274	260 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	HIBADH	P31937	336 aa	Known RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LGSN	Q5TDP6	509 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZNF710	Q8N1W2	664 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MIGA1	Q8NAN2	632 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NSMCE1	Q8WV22	266 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	METTL22	Q9BUU2	404 aa	Predicted RBP	10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	OGFR	Q9NZT2	677 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GGA1	Q9UJY5	639 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SYNRG	Q9UMZ2	1314 aa		10.05	□□□□□ -0.8
ECHDC2-222	ENST00000539680	EDC4	Q6P2E9	1401 aa	Known RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	P4HA1	P13674	534 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SLC39A6	Q13433	755 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BIRC3	Q13489	604 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CNBD1	Q8NA66	436 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	C19orf44	Q9H6X5	657 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TRAF5	O00463	557 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SPOP	O43791	374 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCNT1	O60563	726 aa	Known RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PPP2R3A	Q06190	1150 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GPATCH11	Q8N954	259 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PRPF31	Q8WWY3	499 aa	Known RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	FAM114A2	Q9NRY5	505 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PARP2	Q9UGN5	583 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PNMA2	Q9UL42	364 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZBTB21	Q9ULJ3	1066 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	USH1C	Q9Y6N9	552 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TRAPPC8	Q9Y2L5	1435 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SEPT6	Q14141	434 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CACNA2D3	Q8IZS8	1091 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ERO1A	Q96HE7	468 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZNF830	Q96NB3	372 aa	Predicted RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	STK32B	Q9NY57	414 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ZRANB1	Q9UGI0	708 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KDM3A	Q9Y4C1	1321 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	KIAA0556	O60303	1618 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GOLGA6C	A6NDK9	693 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GOLGA6B	A6NDN3	693 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCDC160	A6NGH7	325 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GOLGA6D	P0CG33	693 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PAK1	Q13153	545 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TTC31	Q49AM3	519 aa	Predicted RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CCDC125	Q86Z20	511 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	MLKL	Q8NB16	471 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	RNF34	Q969K3	372 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	GOLGA6A	Q9NYA3	693 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ANO1	Q5XXA6	986 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ARHGAP24	Q8N264	748 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LEO1	Q8WVC0	666 aa	Predicted RBP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	USP26	Q9BXU7	913 aa		10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.04	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ARHGEF35	A5YM69	484 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	VWA3A	A6NCI4	1184 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	EYA2	O00167	538 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CETN3	O15182	167 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	ANXA1	P04083	346 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	VIM	P08670	466 aa	Known RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	DNM2	P50570	870 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	LETM2	Q2VYF4	491 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	TNNI3K	Q59H18	835 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	HACE1	Q8IYU2	909 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	AFAP1L1	Q8TED9	768 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	CLSTN2	Q9H4D0	955 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	SERPINA10	Q9UK55	444 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	PA2G4	Q9UQ80	394 aa	Known RBP	10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	FPGT-TNNI3K	V9GXZ4	949 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	BCR	P11274	1271 aa		10.03	□□□□□ -0.8
ECHDC2-222	ENST00000539680	NLRP12	P59046	1061 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms