RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 DCTN4Q9UJW0 460 aa10.23□□□□□ -0.77
CCDC7-209ENST00000539197 JUNBP17275 347 aaPredicted RBP10.22□□□□□ -0.77
CCDC7-209ENST00000539197 ITGB5P18084 799 aa10.21□□□□□ -0.77
CCDC7-209ENST00000539197 MAP1SQ66K74 1059 aaPredicted RBP10.21□□□□□ -0.77
CCDC7-209ENST00000539197 MAPK1P28482 360 aa10.2□□□□□ -0.78
CCDC7-209ENST00000539197 CD96P40200 585 aa10.2□□□□□ -0.78
CCDC7-209ENST00000539197 C3orf58Q8NDZ4 430 aa10.2□□□□□ -0.78
CCDC7-209ENST00000539197 MISP3Q96FF7 219 aa10.2□□□□□ -0.78
CCDC7-209ENST00000539197 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
CCDC7-209ENST00000539197 ARNTP27540 789 aa10.19□□□□□ -0.78
CCDC7-209ENST00000539197 PLCB3Q01970 1234 aa10.19□□□□□ -0.78
CCDC7-209ENST00000539197 ENOX2Q16206 610 aaKnown RBP10.19□□□□□ -0.78
CCDC7-209ENST00000539197 ISL2Q96A47 359 aa10.19□□□□□ -0.78
CCDC7-209ENST00000539197 PCOLCE2Q9UKZ9 415 aa10.19□□□□□ -0.78
CCDC7-209ENST00000539197 TREHO43280 583 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 PLCL1Q15111 1095 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 GRIN3AQ8TCU5 1115 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 NETO1Q8TDF5 533 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 GPBAR1Q8TDU6 330 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 CSADQ9Y600 493 aa10.18□□□□□ -0.78
CCDC7-209ENST00000539197 FBXO24O75426 580 aa10.17□□□□□ -0.78
CCDC7-209ENST00000539197 PAGE1O75459 146 aa10.17□□□□□ -0.78
CCDC7-209ENST00000539197 ZC3H12AQ5D1E8 599 aaKnown RBP10.17□□□□□ -0.78
CCDC7-209ENST00000539197 OGFOD2Q6N063 350 aa10.17□□□□□ -0.78
CCDC7-209ENST00000539197 DUSP23Q9BVJ7 150 aa10.17□□□□□ -0.78
CCDC7-209ENST00000539197 NME2P22392 152 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 RASIP1Q5U651 963 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 TPTE2Q6XPS3 522 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 UBE3DQ7Z6J8 389 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 EMILIN2Q9BXX0 1053 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 CBX8Q9HC52 389 aa10.16□□□□□ -0.78
CCDC7-209ENST00000539197 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
CCDC7-209ENST00000539197 CD8BP10966 210 aa10.15□□□□□ -0.78
CCDC7-209ENST00000539197 ZNF792Q3KQV3 632 aa10.15□□□□□ -0.78
CCDC7-209ENST00000539197 NECAB3Q96P71 396 aaPredicted RBP10.15□□□□□ -0.78
CCDC7-209ENST00000539197 OSBPL7Q9BZF2 842 aa10.15□□□□□ -0.78
CCDC7-209ENST00000539197 WWC3Q9ULE0 1092 aa10.15□□□□□ -0.78
CCDC7-209ENST00000539197 ENC1O14682 589 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 PAPLNO95428 1278 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 MAPK8P45983 427 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 ARHGAP27Q6ZUM4 889 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 TOP6BLQ8N6T0 577 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 VAV3Q9UKW4 847 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 PLAGL2Q9UPG8 496 aa10.14□□□□□ -0.79
CCDC7-209ENST00000539197 BIN1O00499 593 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 BRD1O95696 1058 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 BMP6P22004 513 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 OXCT1P55809 520 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 PPM1JQ5JR12 505 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.13□□□□□ -0.79
CCDC7-209ENST00000539197 ACSBG1Q96GR2 724 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 MKNK2Q9HBH9 465 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 CACNA2D2Q9NY47 1150 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 ADAMTS6Q9UKP5 1117 aa10.13□□□□□ -0.79
CCDC7-209ENST00000539197 DCDC2CA8MYV0 355 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 NTF4P34130 210 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 ERVK-24P63145 666 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 PRKCQQ04759 706 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 POU5F2Q8N7G0 328 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 RNF214Q8ND24 703 aa10.12□□□□□ -0.79
CCDC7-209ENST00000539197 ITIH2P19823 946 aa10.11□□□□□ -0.79
CCDC7-209ENST00000539197 FUT4P22083 530 aa10.11□□□□□ -0.79
CCDC7-209ENST00000539197 IFI16Q16666 785 aaKnown RBP10.11□□□□□ -0.79
CCDC7-209ENST00000539197 ERICH6Q7L0X2 663 aa10.11□□□□□ -0.79
CCDC7-209ENST00000539197 C12orf40Q86WS4 652 aa10.11□□□□□ -0.79
CCDC7-209ENST00000539197 HEXIM2Q96MH2 286 aaKnown RBP10.11□□□□□ -0.79
CCDC7-209ENST00000539197 FZD5Q13467 585 aa10.1□□□□□ -0.79
CCDC7-209ENST00000539197 TIMELESSQ9UNS1 1208 aa10.1□□□□□ -0.79
CCDC7-209ENST00000539197 RBAK-RBAKDNI3L0D1 243 aa10.09□□□□□ -0.79
CCDC7-209ENST00000539197 CEACAM5P06731 702 aa10.09□□□□□ -0.79
CCDC7-209ENST00000539197 RNASE1P07998 156 aaKnown RBP10.09□□□□□ -0.79
CCDC7-209ENST00000539197 HRASLS5Q96KN8 279 aa10.09□□□□□ -0.79
CCDC7-209ENST00000539197 MBNL3Q9NUK0 354 aaKnown RBP10.09□□□□□ -0.79
CCDC7-209ENST00000539197 SAMM50Q9Y512 469 aa10.09□□□□□ -0.79
CCDC7-209ENST00000539197 CARMIL2Q6F5E8 1435 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 TMEM265A0A087WTH1 108 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 KRTAP4-8A0A0G2JLE6 195 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 GSTT1P30711 240 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 FMR1Q06787 632 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCDC7-209ENST00000539197 AOC3Q16853 763 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 FAM214BQ7L5A3 538 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 CEP44Q9C0F1 390 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 IVNS1ABPQ9Y6Y0 642 aa10.08□□□□□ -0.8
CCDC7-209ENST00000539197 CELA3AP09093 270 aa10.07□□□□□ -0.8
CCDC7-209ENST00000539197 ATG4DQ86TL0 474 aaPredicted RBP10.07□□□□□ -0.8
CCDC7-209ENST00000539197 PI4K2BQ8TCG2 481 aa10.07□□□□□ -0.8
CCDC7-209ENST00000539197 SRCIN1Q9C0H9 1055 aa10.07□□□□□ -0.8
CCDC7-209ENST00000539197 RC3H2Q9HBD1 1191 aaKnown RBP10.07□□□□□ -0.8
CCDC7-209ENST00000539197 PICK1Q9NRD5 415 aa10.07□□□□□ -0.8
CCDC7-209ENST00000539197 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.07□□□□□ -0.8
CCDC7-209ENST00000539197 C8AP07357 584 aa10.06□□□□□ -0.8
CCDC7-209ENST00000539197 RING1Q06587 406 aa10.06□□□□□ -0.8
CCDC7-209ENST00000539197 FBF1Q8TES7 1133 aa10.06□□□□□ -0.8
CCDC7-209ENST00000539197 PRDM7Q9NQW5 492 aa10.06□□□□□ -0.8
CCDC7-209ENST00000539197 PPM1HQ9ULR3 514 aa10.06□□□□□ -0.8
CCDC7-209ENST00000539197 PTPN11Q06124 597 aaPredicted RBP10.05□□□□□ -0.8
CCDC7-209ENST00000539197 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
CCDC7-209ENST00000539197 TRIM37O94972 964 aa10.04□□□□□ -0.8
CCDC7-209ENST00000539197 ANGEL2Q5VTE6 544 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms