RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 IFNL3Q8IZI9 196 aa28.1■■■□□ 2.09
TMEM260-202ENST00000538838 MKRN1Q9UHC7 482 aaKnown RBP28.1■■■□□ 2.09
TMEM260-202ENST00000538838 SCAF8Q9UPN6 1271 aaKnown RBP28.1■■■□□ 2.09
TMEM260-202ENST00000538838 TCP10Q12799 353 aa28.09■■■□□ 2.09
TMEM260-202ENST00000538838 CNTNAP1P78357 1384 aa28.08■■■□□ 2.09
TMEM260-202ENST00000538838 TDO2P48775 406 aa28.08■■■□□ 2.09
TMEM260-202ENST00000538838 NACAP1Q9BZK3 213 aa28.08■■■□□ 2.09
TMEM260-202ENST00000538838 SIPA1L1O43166 1804 aa28.08■■■□□ 2.09
TMEM260-202ENST00000538838 MAP4K1Q92918 833 aa28.07■■■□□ 2.08
TMEM260-202ENST00000538838 OSBPL5Q9H0X9 879 aaPredicted RBP28.07■■■□□ 2.08
TMEM260-202ENST00000538838 NAPBQ9H115 298 aa28.07■■■□□ 2.08
TMEM260-202ENST00000538838 SAP30BPQ9UHR5 308 aaKnown RBP28.07■■■□□ 2.08
TMEM260-202ENST00000538838 PNMA8AQ86V59 439 aaPredicted RBP28.07■■■□□ 2.08
TMEM260-202ENST00000538838 ZFPM1Q8IX07 1006 aa28.07■■■□□ 2.08
TMEM260-202ENST00000538838 DDRGK1Q96HY6 314 aa28.07■■■□□ 2.08
TMEM260-202ENST00000538838 RBM8AQ9Y5S9 174 aaKnown RBP28.07■■■□□ 2.08
TMEM260-202ENST00000538838 FGAP02671 866 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 SLC4A8Q2Y0W8 1093 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 FKBP1CQ5VVH2 108 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 GIMAP6Q6P9H5 292 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 MCM9Q9NXL9 1143 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 ZMYM6O95789 1325 aa28.06■■■□□ 2.08
TMEM260-202ENST00000538838 ENTPD3O75355 529 aa28.05■■■□□ 2.08
TMEM260-202ENST00000538838 NPM3O75607 178 aaKnown RBP28.05■■■□□ 2.08
TMEM260-202ENST00000538838 POTEIP0CG38 1075 aa28.05■■■□□ 2.08
TMEM260-202ENST00000538838 POTEJP0CG39 1038 aa28.05■■■□□ 2.08
TMEM260-202ENST00000538838 ALX1Q15699 326 aa28.05■■■□□ 2.08
TMEM260-202ENST00000538838 APOBEC3FQ8IUX4 373 aaKnown RBP28.04■■■□□ 2.08
TMEM260-202ENST00000538838 U3KPZ7 1027 aaPredicted RBP28.04■■■□□ 2.08
TMEM260-202ENST00000538838 PITPNM2Q9BZ72 1349 aa28.04■■■□□ 2.08
TMEM260-202ENST00000538838 COL2A1P02458 1487 aaPredicted RBP28.04■■■□□ 2.08
TMEM260-202ENST00000538838 CYP2D7A0A087X1C5 515 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 EIF5BO60841 1220 aaKnown RBP28.03■■■□□ 2.08
TMEM260-202ENST00000538838 CYP2D6P10635 497 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 TNFAIP1Q13829 316 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 CTR9Q6PD62 1173 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 USP26Q9BXU7 913 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 PALD1Q9ULE6 856 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 USP17L12C9JPN9 530 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 USP17L21D6R901 530 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 EVX2Q03828 476 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 FAM83AQ86UY5 434 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 FAM151AQ8WW52 585 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 TMEM39BQ9GZU3 492 aa28.03■■■□□ 2.08
TMEM260-202ENST00000538838 ARPP21Q9UBL0 812 aaPredicted RBP28.03■■■□□ 2.08
TMEM260-202ENST00000538838 TNNI2P48788 182 aa28.02■■■□□ 2.08
TMEM260-202ENST00000538838 SH3BP5LQ7L8J4 393 aa28.02■■■□□ 2.08
TMEM260-202ENST00000538838 ZC3H15Q8WU90 426 aaKnown RBP28.02■■■□□ 2.08
TMEM260-202ENST00000538838 RASA3Q14644 834 aa28.01■■■□□ 2.07
TMEM260-202ENST00000538838 ATRNL1Q5VV63 1379 aa28.01■■■□□ 2.07
TMEM260-202ENST00000538838 DCPSQ96C86 337 aaKnown RBP28.01■■■□□ 2.07
TMEM260-202ENST00000538838 GPBP1L1Q9HC44 474 aaPredicted RBP28.01■■■□□ 2.07
TMEM260-202ENST00000538838 CLEC11AQ9Y240 323 aa28.01■■■□□ 2.07
TMEM260-202ENST00000538838 DDTLA6NHG4 134 aaPredicted RBP28■■■□□ 2.07
TMEM260-202ENST00000538838 MINDY4BA8MYZ0 360 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 SMIM22K7EJ46 135 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 HAND2P61296 217 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 ZSCAN29Q8IWY8 852 aaPredicted RBP28■■■□□ 2.07
TMEM260-202ENST00000538838 CDAN1Q8IWY9 1227 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 DEFB129Q9H1M3 183 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 PGAP2Q9UHJ9 254 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 CTNNA3Q9UI47 895 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 MYH8P13535 1937 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 EPB41L2O43491 1005 aaKnown RBP28■■■□□ 2.07
TMEM260-202ENST00000538838 POLR3DP05423 398 aaPredicted RBP28■■■□□ 2.07
TMEM260-202ENST00000538838 SBK1Q52WX2 424 aa28■■■□□ 2.07
TMEM260-202ENST00000538838 YY1P25490 414 aa27.99■■■□□ 2.07
TMEM260-202ENST00000538838 PLCD1P51178 756 aa27.99■■■□□ 2.07
TMEM260-202ENST00000538838 NECTIN1Q15223 517 aa27.99■■■□□ 2.07
TMEM260-202ENST00000538838 ADM5C9JUS6 153 aa27.98■■■□□ 2.07
TMEM260-202ENST00000538838 CYP21A2P08686 494 aa27.98■■■□□ 2.07
TMEM260-202ENST00000538838 PPARAQ07869 468 aa27.98■■■□□ 2.07
TMEM260-202ENST00000538838 C12orf60Q5U649 245 aa27.98■■■□□ 2.07
TMEM260-202ENST00000538838 AMOTL1Q8IY63 956 aa27.98■■■□□ 2.07
TMEM260-202ENST00000538838 SLC27A2O14975 620 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 HSPA4P34932 840 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 IMMTQ16891 758 aaKnown RBP27.97■■■□□ 2.07
TMEM260-202ENST00000538838 CREB3L3Q68CJ9 461 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 KRT26Q7Z3Y9 468 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 LDHDQ86WU2 507 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 SULF1Q8IWU6 871 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 TEPSINQ96N21 525 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 NBPF3Q9H094 633 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 TAF6LQ9Y6J9 622 aa27.97■■■□□ 2.07
TMEM260-202ENST00000538838 STK11IPQ8N1F8 1099 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 CSRNP1Q96S65 589 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 DHX36Q9H2U1 1008 aaKnown RBP27.96■■■□□ 2.07
TMEM260-202ENST00000538838 ROBO3Q96MS0 1386 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 ZNF213O14771 459 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 HLA-DOAP06340 250 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 CTDSPL2Q05D32 466 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 PRAMEF18Q5VWM3 479 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 DLK2Q6UY11 383 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 TTC6Q86TZ1 520 aa27.96■■■□□ 2.07
TMEM260-202ENST00000538838 UPF2Q9HAU5 1272 aaKnown RBP27.96■■■□□ 2.07
TMEM260-202ENST00000538838 MAP1SQ66K74 1059 aaPredicted RBP27.95■■■□□ 2.06
TMEM260-202ENST00000538838 TBC1D10CQ8IV04 446 aa27.95■■■□□ 2.06
TMEM260-202ENST00000538838 PPP2R3BQ9Y5P8 575 aa27.95■■■□□ 2.06
TMEM260-202ENST00000538838 SLURP2P0DP57 97 aa27.94■■■□□ 2.06
TMEM260-202ENST00000538838 MCCP23508 829 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms