RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	DOCK2	Q92608	1830 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	MAP3K12	Q12852	859 aa		15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	VGLL4	Q14135	290 aa		15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TNS4	Q8IZW8	715 aa		15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	WRNIP1	Q96S55	665 aa		15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	DHX36	Q9H2U1	1008 aa	Known RBP	15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	SNRK	Q9NRH2	765 aa		15	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TRPA1	O75762	1119 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ATP5J	P18859	108 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	GTF2A2	P52657	109 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	PPAT	Q06203	517 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TCP10	Q12799	353 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	OPTN	Q96CV9	577 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	FZD1	Q9UP38	647 aa		14.99	□□□□□ -0.01
CLTCL1-205	ENST00000538828	MYO5A	Q9Y4I1	1855 aa	Known RBP	14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	PPIL2	Q13356	520 aa		14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	IFNL1	Q8IU54	200 aa		14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	MS4A4A	Q96JQ5	239 aa		14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	DDX4	Q9NQI0	724 aa	Known RBP	14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	PIH1D3	Q9NQM4	214 aa	Known RBP	14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	SNCAIP	Q9Y6H5	919 aa		14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	CASP8AP2	Q9UKL3	1982 aa		14.98	□□□□□ -0.01
CLTCL1-205	ENST00000538828	GJA5	P36382	358 aa		14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	SH3BP5L	Q7L8J4	393 aa		14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	OSBPL5	Q9H0X9	879 aa	Predicted RBP	14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ELP3	Q9H9T3	547 aa		14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	HERC5	Q9UII4	1024 aa	Known RBP	14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TAOK2	Q9UL54	1235 aa		14.97	□□□□□ -0.01
CLTCL1-205	ENST00000538828	FOCAD	Q5VW36	1801 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	DDTL	A6NHG4	134 aa	Predicted RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	PHF20L1	A8MW92	1017 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	CTNND1	O60716	968 aa	Known RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	IDH1	O75874	414 aa	Known RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	MIGA2	Q7L4E1	593 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	METTL16	Q86W50	562 aa	Known RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ZFPM1	Q8IX07	1006 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TEX11	Q8IYF3	940 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	YTHDC1	Q96MU7	727 aa	Known RBP	14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	HAUS7	Q99871	368 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	TBC1D2	Q9BYX2	928 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	PI4KB	Q9UBF8	816 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	KCNH4	Q9UQ05	1017 aa		14.96	□□□□□ -0.01
CLTCL1-205	ENST00000538828	CETP	P11597	493 aa		14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CYP7A1	P22680	504 aa		14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	SNAPC2	Q13487	334 aa		14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	FOXP4	Q8IVH2	680 aa	Predicted RBP	14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	GINM1	Q9NU53	330 aa		14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	AATF	Q9NY61	560 aa	Known RBP eCLIP	14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PCDHB15	Q9Y5E8	787 aa		14.95	□□□□□ -0.02
CLTCL1-205	ENST00000538828	GPR25	O00155	361 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CXCL11	O14625	94 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	INPP5B	P32019	993 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	HDAC1	Q13547	482 aa	Predicted RBP	14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PKN2	Q16513	984 aa	Known RBP	14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ADGRA1	Q86SQ6	560 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	SCYL3	Q8IZE3	742 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	MAGEB6	Q8N7X4	407 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ZKSCAN4	Q969J2	545 aa	Predicted RBP	14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	GPATCH3	Q96I76	525 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ANTXR1	Q9H6X2	564 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PAG1	Q9NWQ8	432 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CDK5RAP2	Q96SN8	1893 aa		14.94	□□□□□ -0.02
CLTCL1-205	ENST00000538828	APBB1	O00213	710 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	IRF6	O14896	467 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	MKRN3	Q13064	507 aa	Known RBP	14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PICALM	Q13492	652 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	GCC1	Q96CN9	775 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	OTUD5	Q96G74	571 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PTPN18	Q99952	460 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ECHDC1	Q9NTX5	307 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TSKS	Q9UJT2	592 aa		14.93	□□□□□ -0.02
CLTCL1-205	ENST00000538828	FLT1	P17948	1338 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TTC41P	Q6P2S7	1318 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CCL15-CCL14	A0A0B4J2E2	113 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CCL15	Q16663	113 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	SLC9C2	Q5TAH2	1124 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ZSCAN25	Q6NSZ9	544 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TGFBRAP1	Q8WUH2	860 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	BRI3BP	Q8WY22	251 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CRBN	Q96SW2	442 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	RIOK1	Q9BRS2	568 aa	Known RBP	14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PICK1	Q9NRD5	415 aa		14.92	□□□□□ -0.02
CLTCL1-205	ENST00000538828	DOCK1	Q14185	1865 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TCRBV5S4A2T	A0A5A2	114 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	GOLIM4	O00461	696 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	TBC1D8	O95759	1140 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PDE6A	P16499	860 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	PTPRA	P18433	802 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	UBE3C	Q15386	1083 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	CNKSR2	Q8WXI2	1034 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	EHD4	Q9H223	541 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	BOLA2	Q9H3K6	86 aa		14.91	□□□□□ -0.02
CLTCL1-205	ENST00000538828	ERC2	O15083	957 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	FKTN	O75072	461 aa		14.9	□□□□□ -0.02
CLTCL1-205	ENST00000538828	HLA-DOA	P06340	250 aa		14.9	□□□□□ -0.02

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