RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 MYO5AQ9Y4I1 1855 aaKnown RBP10.66□□□□□ -0.7
DDB1-212ENST00000538470 ADGRA2Q96PE1 1338 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 GPR75-ASB3A0A0A6YYF3 556 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 CXCL11O14625 94 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 BCAR3O75815 825 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 UQCRFS1P1P0C7P4 283 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 MAP3K10Q02779 954 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 MECOMQ03112 1051 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 G3BP1Q13283 466 aaKnown RBP eCLIP10.66□□□□□ -0.72e-7■■■□□ 16.2
DDB1-212ENST00000538470 GORABQ5T7V8 394 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 NBPF11Q86T75 865 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 ZSCAN29Q8IWY8 852 aaPredicted RBP10.66□□□□□ -0.7
DDB1-212ENST00000538470 SCYL3Q8IZE3 742 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.66□□□□□ -0.7
DDB1-212ENST00000538470 SPATA5Q8NB90 893 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 ZNF333Q96JL9 665 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 PARK7Q99497 189 aaKnown RBP10.66□□□□□ -0.7
DDB1-212ENST00000538470 PICK1Q9NRD5 415 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
DDB1-212ENST00000538470 PDHXO00330 501 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 IGSF3O75054 1194 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 LDHCP07864 332 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 CAP1Q01518 475 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 POLA2Q14181 598 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 SLC9C1Q4G0N8 1177 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 C17orf99Q6UX52 265 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 FTSJ3Q8IY81 847 aaKnown RBP10.65□□□□□ -0.7
DDB1-212ENST00000538470 TMEM57Q8N5G2 664 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 NEUROD6Q96NK8 337 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 TNNQ9UQP3 1299 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 PTCH2Q9Y6C5 1203 aa10.65□□□□□ -0.7
DDB1-212ENST00000538470 A0A0G2JLL6 359 aaPredicted RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 POTEFA5A3E0 1075 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 PHF20L1A8MW92 1017 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 TBC1D12O60347 775 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 CTNND1O60716 968 aaKnown RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 KCNA4P22459 653 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 RHBDL3P58872 404 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
DDB1-212ENST00000538470 PICALMQ13492 652 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 MOGSQ13724 837 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 SH3BP5LQ7L8J4 393 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 FASTKD5Q7L8L6 764 aaKnown RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 PRRT2Q7Z6L0 340 aaPredicted RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 ZFPM1Q8IX07 1006 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 MIER1Q8N108 512 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 SSH3Q8TE77 659 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 NSUN4Q96CB9 384 aaKnown RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 TMEM106CQ9BVX2 250 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 DDX4Q9NQI0 724 aaKnown RBP10.64□□□□□ -0.71
DDB1-212ENST00000538470 SLC45A1Q9Y2W3 748 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 BRCA2P51587 3418 aa10.64□□□□□ -0.71
DDB1-212ENST00000538470 MYH1P12882 1939 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 DDTLA6NHG4 134 aaPredicted RBP10.63□□□□□ -0.71
DDB1-212ENST00000538470 PTPRAP18433 802 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 HOXD10P28358 340 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 MCAMP43121 646 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 TNNI3KQ59H18 835 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 ZNF384Q8TF68 577 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
DDB1-212ENST00000538470 TBC1D2Q9BYX2 928 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 RAI14Q9P0K7 980 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.63□□□□□ -0.71
DDB1-212ENST00000538470 FPGT-TNNI3KV9GXZ4 949 aa10.63□□□□□ -0.71
DDB1-212ENST00000538470 ZBED9Q6R2W3 1325 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 PLCG2P16885 1265 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 ATP8B2P98198 1209 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 OS9Q13438 667 aaPredicted RBP10.62□□□□□ -0.71
DDB1-212ENST00000538470 CCDC158Q5M9N0 1113 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 TTC39AQ5SRH9 613 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 GPAT2Q6NUI2 795 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 PI16Q6UXB8 463 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
DDB1-212ENST00000538470 ARHGAP39Q9C0H5 1083 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 OSBPL5Q9H0X9 879 aaPredicted RBP10.62□□□□□ -0.71
DDB1-212ENST00000538470 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 CPA4Q9UI42 421 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 AFG3L2Q9Y4W6 797 aa10.62□□□□□ -0.71
DDB1-212ENST00000538470 DDX60LQ5H9U9 1706 aaKnown RBP10.61□□□□□ -0.71
DDB1-212ENST00000538470 BCRP11274 1271 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 PSMC4P43686 418 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 FCGRTP55899 365 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 TEX11Q8IYF3 940 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 TRIM47Q96LD4 638 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.61□□□□□ -0.71
DDB1-212ENST00000538470 LRP2BPQ9P2M1 347 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 PNMA3Q9UL41 463 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
DDB1-212ENST00000538470 ZHX2Q9Y6X8 837 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 NAV1Q8NEY1 1877 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 CEP290O15078 2479 aa10.61□□□□□ -0.71
DDB1-212ENST00000538470 MKI67P46013 3256 aaKnown RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 MYPNQ86TC9 1320 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 SURF6O75683 361 aaKnown RBP10.6□□□□□ -0.71
DDB1-212ENST00000538470 BAG3O95817 575 aa10.6□□□□□ -0.71
DDB1-212ENST00000538470 OSBPP22059 807 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms