RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 AZI2Q9H6S1 392 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 RPS6KB1P23443 525 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 PRIM1P49642 420 aaKnown RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 VAV2P52735 878 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 ZNF569Q5MCW4 686 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 CALUO43852 315 aaPredicted RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 TNFAIP3P21580 790 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 PSMC4P43686 418 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 CDAN1Q8IWY9 1227 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 NOX5Q96PH1 765 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 ANGEL1Q9UNK9 670 aaKnown RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 KARSQ15046 597 aaKnown RBP18.84■□□□□ 0.61
SCARB1-205ENST00000538291 CCDC25Q86WR0 208 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 ANKS4BQ8N8V4 417 aa18.84■□□□□ 0.61
SCARB1-205ENST00000538291 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 NIM1KQ8IY84 436 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 SLC52A2Q9HAB3 445 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 AATFQ9NY61 560 aaKnown RBP eCLIP18.83■□□□□ 0.616e-8■■■□□ 16.7
SCARB1-205ENST00000538291 GPAA1O43292 621 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 SMC5Q8IY18 1101 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 AGTPBP1Q9UPW5 1226 aa18.83■□□□□ 0.61
SCARB1-205ENST00000538291 CTTNBP2Q8WZ74 1663 aa18.83■□□□□ 0.6
SCARB1-205ENST00000538291 ADAMTS12P58397 1594 aa18.83■□□□□ 0.6
SCARB1-205ENST00000538291 ALDH3A1P30838 453 aa18.83■□□□□ 0.6
SCARB1-205ENST00000538291 KRT222Q8N1A0 295 aa18.83■□□□□ 0.6
SCARB1-205ENST00000538291 PRDM1O75626 825 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 TXKP42681 527 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 ADCY7P51828 1080 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 FAM160A1Q05DH4 1040 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 TBC1D8BQ0IIM8 1120 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 TNNQ9UQP3 1299 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 EIF4G3O43432 1585 aaKnown RBP18.82■□□□□ 0.6
SCARB1-205ENST00000538291 SPOPO43791 374 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 LIN9Q5TKA1 542 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 TBC1D22AQ8WUA7 517 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 FAM204AQ9H8W3 233 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 UGGT2Q9NYU1 1516 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 A0A1B0GVL5 298 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 CETN3O15182 167 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 G2E3Q7L622 706 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 IFT81Q8WYA0 676 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 ANAPC4Q9UJX5 808 aa18.82■□□□□ 0.6
SCARB1-205ENST00000538291 A1BGP04217 495 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 RLBP1P12271 317 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 NCAPH2Q6IBW4 605 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 NSMFQ6X4W1 530 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 KRT25Q7Z3Z0 450 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 CPXCR1Q8N123 301 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 CTNND2Q9UQB3 1225 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 NAP1L3Q99457 506 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 LZTS2Q9BRK4 669 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 EIF2AK4Q9P2K8 1649 aaKnown RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 TLDC2A0PJX2 215 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 TAF5LO75529 589 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 PPP2R5BQ15173 497 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 NONOQ15233 471 aaKnown RBP eCLIP18.81■□□□□ 0.62e-6■■■□□ 17.2
SCARB1-205ENST00000538291 CCDC122Q5T0U0 273 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 ARFGAP2Q8N6H7 521 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 ZNF594Q96JF6 807 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 MROH5Q6ZUA9 1318 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 AKR1B15C9JRZ8 316 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 DNM2P50570 870 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 DLGAP5Q15398 846 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 TRERF1Q96PN7 1200 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 SH3BP5O60239 455 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 ERCC5P28715 1186 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 KRT9P35527 623 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 PRKG1Q13976 671 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 RASA3Q14644 834 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 CFAP157Q5JU67 520 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 ORAI2Q96SN7 254 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 LLPHQ9BRT6 129 aaKnown RBP18.81■□□□□ 0.6
SCARB1-205ENST00000538291 USP26Q9BXU7 913 aa18.81■□□□□ 0.6
SCARB1-205ENST00000538291 PIK3C2GO75747 1445 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 SMIM23A6NLE4 172 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 UHRF1BP1Q6BDS2 1440 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 E7EVH7 732 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 ANO1Q5XXA6 986 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 SMC1BQ8NDV3 1235 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 SLC27A2O14975 620 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 BAG6P46379 1132 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 IRX3P78415 501 aaPredicted RBP18.8■□□□□ 0.6
SCARB1-205ENST00000538291 GPR161Q8N6U8 529 aaKnown RBP18.8■□□□□ 0.6
SCARB1-205ENST00000538291 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 CCDC26Q8TAB7 109 aa18.8■□□□□ 0.6
SCARB1-205ENST00000538291 IBTKQ9P2D0 1353 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-205ENST00000538291 M0QZ92 97 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 TUBBP07437 444 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 TRIM14Q14142 442 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 TTC38Q5R3I4 469 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 DNAJC10Q8IXB1 793 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 DIS3L2Q8IYB7 885 aaKnown RBP18.79■□□□□ 0.6
SCARB1-205ENST00000538291 KCNH3Q9ULD8 1083 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 DAPK3O43293 454 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 HAUS7Q99871 368 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 CARD14Q9BXL6 1004 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 LRWD1Q9UFC0 647 aa18.79■□□□□ 0.6
SCARB1-205ENST00000538291 APBA3O96018 575 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms