RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 PDE6AP16499 860 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 DCAF15Q66K64 600 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 SH3BP5LQ7L8J4 393 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 ANKRD13AQ8IZ07 590 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 WBP1LQ9NX94 342 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 DOCK2Q92608 1830 aa27.97■■■□□ 2.07
CLTA-209ENST00000538225 DDTLA6NHG4 134 aaPredicted RBP27.96■■■□□ 2.07
CLTA-209ENST00000538225 SMC5Q8IY18 1101 aa27.96■■■□□ 2.07
CLTA-209ENST00000538225 CSRNP1Q96S65 589 aa27.96■■■□□ 2.07
CLTA-209ENST00000538225 THSD7BQ9C0I4 1608 aa27.96■■■□□ 2.07
CLTA-209ENST00000538225 MAP3K9P80192 1104 aa27.95■■■□□ 2.06
CLTA-209ENST00000538225 TMED8Q6PL24 325 aaPredicted RBP27.95■■■□□ 2.06
CLTA-209ENST00000538225 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.95■■■□□ 2.065e-8■□□□□ 9.7
CLTA-209ENST00000538225 TGFBRAP1Q8WUH2 860 aa27.95■■■□□ 2.06
CLTA-209ENST00000538225 AIDAQ96BJ3 306 aa27.95■■■□□ 2.06
CLTA-209ENST00000538225 TTC41PQ6P2S7 1318 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 ZNF532Q9HCE3 1301 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 AK9Q5TCS8 1911 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 UNCXA6NJT0 531 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 NPM3O75607 178 aaKnown RBP27.94■■■□□ 2.06
CLTA-209ENST00000538225 MX1P20591 662 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.94■■■□□ 2.06
CLTA-209ENST00000538225 WRNIP1Q96S55 665 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 ZNF341Q9BYN7 854 aa27.94■■■□□ 2.06
CLTA-209ENST00000538225 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.94■■■□□ 2.06
CLTA-209ENST00000538225 PCNTO95613 3336 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 SLFNL1Q499Z3 407 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 MAPKAPK5Q8IW41 473 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 BEGAINQ9BUH8 593 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 LNPKQ9C0E8 428 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 OSBPL5Q9H0X9 879 aaPredicted RBP27.93■■■□□ 2.06
CLTA-209ENST00000538225 ELP3Q9H9T3 547 aa27.93■■■□□ 2.06
CLTA-209ENST00000538225 TCRBV5S4A2TA0A5A2 114 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 ERC2O15083 957 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 VGLL4Q14135 290 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 SPRYD7Q5W111 196 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 PI4K2BQ8TCG2 481 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 CSADQ9Y600 493 aa27.92■■■□□ 2.06
CLTA-209ENST00000538225 MAGEB6P1A0A0J9YX57 407 aa27.91■■■□□ 2.06
CLTA-209ENST00000538225 ZKSCAN4Q969J2 545 aaPredicted RBP27.91■■■□□ 2.06
CLTA-209ENST00000538225 WNK4Q96J92 1243 aa27.91■■■□□ 2.06
CLTA-209ENST00000538225 FOXN1O15353 648 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 GLRX3O76003 335 aaKnown RBP27.9■■■□□ 2.06
CLTA-209ENST00000538225 CHGBP05060 677 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 SLURP2P0DP57 97 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 ADD2P35612 726 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 CERS3Q8IU89 383 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 FLT1P17948 1338 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 SALL3Q9BXA9 1300 aa27.9■■■□□ 2.06
CLTA-209ENST00000538225 USP5P45974 858 aa27.89■■■□□ 2.06
CLTA-209ENST00000538225 RIOK1Q9BRS2 568 aaKnown RBP27.89■■■□□ 2.06
CLTA-209ENST00000538225 ATRNL1Q5VV63 1379 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 OTOFQ9HC10 1997 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 INPP5BP32019 993 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 NUCB1Q02818 461 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 ZSCAN25Q6NSZ9 544 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 CHD1LQ86WJ1 897 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 CNKSR2Q8WXI2 1034 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 OPTNQ96CV9 577 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 SAP30BPQ9UHR5 308 aaKnown RBP27.88■■■□□ 2.05
CLTA-209ENST00000538225 ZNF112Q9UJU3 913 aa27.88■■■□□ 2.05
CLTA-209ENST00000538225 GJA5P36382 358 aa27.87■■■□□ 2.05
CLTA-209ENST00000538225 KBTBD3Q8NAB2 608 aa27.87■■■□□ 2.05
CLTA-209ENST00000538225 ZBTB48P10074 688 aaPredicted RBP27.86■■■□□ 2.05
CLTA-209ENST00000538225 PDE1AP54750 535 aa27.86■■■□□ 2.05
CLTA-209ENST00000538225 UBE3CQ15386 1083 aa27.86■■■□□ 2.05
CLTA-209ENST00000538225 DHX36Q9H2U1 1008 aaKnown RBP27.86■■■□□ 2.05
CLTA-209ENST00000538225 STAP2Q9UGK3 403 aa27.86■■■□□ 2.05
CLTA-209ENST00000538225 PALD1Q9ULE6 856 aa27.86■■■□□ 2.05
CLTA-209ENST00000538225 SNCAIPQ9Y6H5 919 aa27.86■■■□□ 2.05
CLTA-209ENST00000538225 COL2A1P02458 1487 aaPredicted RBP27.85■■■□□ 2.05
CLTA-209ENST00000538225 FAM196BA6NMK8 535 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 MAP3K10Q02779 954 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 SLC4A8Q2Y0W8 1093 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 REM2Q8IYK8 340 aaPredicted RBP27.85■■■□□ 2.05
CLTA-209ENST00000538225 LCORLQ8N3X6 602 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 ARMT1Q9H993 441 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.85■■■□□ 2.05
CLTA-209ENST00000538225 TSKSQ9UJT2 592 aa27.85■■■□□ 2.05
CLTA-209ENST00000538225 PHF20L1A8MW92 1017 aa27.84■■■□□ 2.05
CLTA-209ENST00000538225 CTCFP49711 727 aaPredicted RBP27.84■■■□□ 2.05
CLTA-209ENST00000538225 OTUD5Q96G74 571 aa27.84■■■□□ 2.05
CLTA-209ENST00000538225 CRNKL1Q9BZJ0 848 aaKnown RBP27.84■■■□□ 2.05
CLTA-209ENST00000538225 PI4KBQ9UBF8 816 aa27.84■■■□□ 2.05
CLTA-209ENST00000538225 CDK5RAP2Q96SN8 1893 aa27.83■■■□□ 2.05
CLTA-209ENST00000538225 TBC1D12O60347 775 aa27.83■■■□□ 2.05
CLTA-209ENST00000538225 MBD4O95243 580 aa27.83■■■□□ 2.05
CLTA-209ENST00000538225 TM4SF4P48230 202 aa27.82■■■□□ 2.04
CLTA-209ENST00000538225 SREBF2Q12772 1141 aa27.82■■■□□ 2.04
CLTA-209ENST00000538225 ERO1BQ86YB8 467 aa27.82■■■□□ 2.04
CLTA-209ENST00000538225 RNF186Q9NXI6 227 aa27.82■■■□□ 2.04
CLTA-209ENST00000538225 MANSC4A6NHS7 340 aaPredicted RBP27.81■■■□□ 2.04
CLTA-209ENST00000538225 SPDYE5A6NIY4 337 aa27.81■■■□□ 2.04
CLTA-209ENST00000538225 RNF113AO15541 343 aaKnown RBP27.81■■■□□ 2.04
CLTA-209ENST00000538225 CA12O43570 354 aa27.81■■■□□ 2.04
CLTA-209ENST00000538225 TRPA1O75762 1119 aa27.81■■■□□ 2.04
CLTA-209ENST00000538225 FSD1Q9BTV5 496 aa27.81■■■□□ 2.04
CLTA-209ENST00000538225 PUS7LQ9H0K6 701 aaKnown RBP27.81■■■□□ 2.04
CLTA-209ENST00000538225 FOCADQ5VW36 1801 aa27.81■■■□□ 2.04
CLTA-209ENST00000538225 HSPA8P11142 646 aaKnown RBP27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms