RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	CITED4	Q96RK1	184 aa		7.01	□□□□□ -1.29
NPIPB3-208	ENST00000537983	C11orf16	Q9NQ32	467 aa		7.01	□□□□□ -1.29
NPIPB3-208	ENST00000537983	KCNH4	Q9UQ05	1017 aa		7.01	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CCDC9	Q9Y3X0	531 aa	Known RBP	7.01	□□□□□ -1.29
NPIPB3-208	ENST00000537983	EGFR	P00533	1210 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GAS6	Q14393	721 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GRIN2C	Q14957	1233 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FAM182B	Q5T319	152 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ZKSCAN2	Q63HK3	967 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	TMC7	Q7Z402	723 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GPR161	Q8N6U8	529 aa	Known RBP	7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	RTF1	Q92541	710 aa	Known RBP	7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	MBIP	Q9NS73	344 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SMC4	Q9NTJ3	1288 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	PHF24	Q9UPV7	400 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	AHDC1	Q5TGY3	1603 aa	Predicted RBP	7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	RGPD5	Q99666	1765 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ADAMTS7	Q9UKP4	1686 aa		7	□□□□□ -1.29
NPIPB3-208	ENST00000537983	LTBP4	Q8N2S1	1624 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FAM83G	A6ND36	823 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CHL1	O00533	1208 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CD33	P20138	364 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FGFR3	P22607	806 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	USP5	P45974	858 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	MTHFSD	Q2M296	383 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CMTR1	Q8N1G2	835 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ANKRD24	Q8TF21	1146 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	TRERF1	Q96PN7	1200 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	THUMPD2	Q9BTF0	503 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	BABAM1	Q9NWV8	329 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	MARK1	Q9P0L2	795 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	LAS1L	Q9Y4W2	734 aa	Known RBP	6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SOS1	Q07889	1333 aa	Predicted RBP	6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ERBB4	Q15303	1308 aa		6.99	□□□□□ -1.29
NPIPB3-208	ENST00000537983	PKD1L3	Q7Z443	1732 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	PARP4	Q9UKK3	1724 aa	Known RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CEMIP	Q8WUJ3	1361 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	KDM3B	Q7LBC6	1761 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GNAT3	A8MTJ3	354 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GPR182	O15218	404 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	IPO8	O15397	1037 aa	Known RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	RPLP1	P05386	114 aa	Known RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	PCSK2	P16519	638 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CTBS	Q01459	385 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FOXR1	Q6PIV2	292 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	CENPQ	Q7L2Z9	268 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	NPAS4	Q8IUM7	802 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FTSJ3	Q8IY81	847 aa	Known RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SSH1	Q8WYL5	1049 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	FRAT1	Q92837	279 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	LTV1	Q96GA3	475 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	BCL2L13	Q9BXK5	485 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	GSX2	Q9BZM3	304 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	KDM2B	Q8NHM5	1336 aa		6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	COL22A1	Q8NFW1	1626 aa	Predicted RBP	6.98	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ROBO1	Q9Y6N7	1651 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	VIRMA	Q69YN4	1812 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983		A6NHS1	94 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	UBAP1L	F5GYI3	381 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	XYLB	O75191	536 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	VAMP4	O75379	141 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	TRIM27	P14373	513 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SPEM2	Q0P670	501 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	NFX1	Q12986	1120 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	DCTN1	Q14203	1278 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	DSC3	Q14574	896 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	MVP	Q14764	893 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	TWISTNB	Q3B726	338 aa	Predicted RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	AMOT	Q4VCS5	1084 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	NBPF6	Q5VWK0	638 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	XKR5	Q6UX68	686 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ATF7IP	Q6VMQ6	1270 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	MCM10	Q7L590	875 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	DZIP1L	Q8IYY4	767 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	RGS22	Q8NE09	1264 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	PANK1	Q8TE04	598 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ARHGAP45	Q92619	1136 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	DDX17	Q92841	729 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	ALKBH8	Q96BT7	664 aa	Known RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	NBPF4	Q96M43	638 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	DMRTB1	Q96MA1	342 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SLC30A3	Q99726	388 aa		6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	SIPA1L3	O60292	1781 aa	Predicted RBP	6.97	□□□□□ -1.29
NPIPB3-208	ENST00000537983	N4BP2	Q86UW6	1770 aa	Predicted RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	ANKRD33B	A6NCL7	494 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	C2CD2L	O14523	706 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	TREH	O43280	583 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	EHHADH	Q08426	723 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	CCIN	Q13939	588 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	AKAP4	Q5JQC9	854 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	LCE2C	Q5TA81	110 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	PDE12	Q6L8Q7	609 aa	Known RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	USHBP1	Q8N6Y0	703 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	CHMP4B	Q9H444	224 aa	Known RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	TSPYL4	Q9UJ04	414 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	DDX19B	Q9UMR2	479 aa		6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.96	□□□□□ -1.3
NPIPB3-208	ENST00000537983	RLBP1	P12271	317 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms