RNA–Protein interactions for RNA: ENST00000537750.5

SYNE1-236, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-236ENST00000537750 RAB21Q9UL25 225 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 USP5P45974 858 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 AMOTQ4VCS5 1084 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 ICE2Q659A1 982 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 LRRC31Q6UY01 552 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
SYNE1-236ENST00000537750 MDM2Q00987 491 aaPredicted RBP17.06■□□□□ 0.32
SYNE1-236ENST00000537750 GRIN1Q05586 938 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 CASP8Q14790 479 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 FBXL16Q8N461 479 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 GOLGA6L1Q8N7Z2 621 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 MSANTD4Q8NCY6 345 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 A0A1B0GUL7 405 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
SYNE1-236ENST00000537750 IMMTQ16891 758 aaKnown RBP17.06■□□□□ 0.32
SYNE1-236ENST00000537750 CEP112Q8N8E3 955 aa17.06■□□□□ 0.32
SYNE1-236ENST00000537750 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
SYNE1-236ENST00000537750 UBR1Q8IWV7 1749 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 AKR1B15C9JRZ8 316 aaPredicted RBP17.05■□□□□ 0.32
SYNE1-236ENST00000537750 KIF5CO60282 957 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 ERLIN1O75477 346 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 MAGEA9P43362 315 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 TTC31Q49AM3 519 aaPredicted RBP17.05■□□□□ 0.32
SYNE1-236ENST00000537750 RGS22Q8NE09 1264 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 TOMM22Q9NS69 142 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
SYNE1-236ENST00000537750 MYO1BO43795 1136 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 RBL2Q08999 1139 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 NR1I3Q14994 352 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 NOM1Q5C9Z4 860 aaKnown RBP17.05■□□□□ 0.32
SYNE1-236ENST00000537750 ZNF790Q6PG37 636 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 SLC35F6Q8N357 371 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 ANKRD24Q8TF21 1146 aa17.05■□□□□ 0.32
SYNE1-236ENST00000537750 ZNF594Q96JF6 807 aaPredicted RBP17.05■□□□□ 0.32
SYNE1-236ENST00000537750 FAM237AA0A1B0GTK4 181 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 LRRC24Q50LG9 513 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 TSPOAP1O95153 1857 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 RALYLQ86SE5 291 aaKnown RBP17.04■□□□□ 0.32
SYNE1-236ENST00000537750 NOA1Q8NC60 698 aaKnown RBP17.04■□□□□ 0.32
SYNE1-236ENST00000537750 FAM204AQ9H8W3 233 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 SEC31BQ9NQW1 1179 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 SERTAD1Q9UHV2 236 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
SYNE1-236ENST00000537750 POSTNQ15063 836 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 HSP90B2PQ58FF3 399 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 POLR2DO15514 142 aaKnown RBP17.03■□□□□ 0.32
SYNE1-236ENST00000537750 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 CYB5RLQ6IPT4 315 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
SYNE1-236ENST00000537750 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
SYNE1-236ENST00000537750 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 LTN1O94822 1766 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 RPS6KA5O75582 802 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 ACRBPQ8NEB7 543 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 TBX22Q9Y458 520 aa17.03■□□□□ 0.32
SYNE1-236ENST00000537750 CTAGE9A4FU28 777 aa17.02■□□□□ 0.32
SYNE1-236ENST00000537750 STX17P56962 302 aa17.02■□□□□ 0.32
SYNE1-236ENST00000537750 CTR9Q6PD62 1173 aa17.02■□□□□ 0.32
SYNE1-236ENST00000537750 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
SYNE1-236ENST00000537750 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
SYNE1-236ENST00000537750 ZNF496Q96IT1 587 aaPredicted RBP17.02■□□□□ 0.32
SYNE1-236ENST00000537750 POTEB2H3BUK9 544 aa17.02■□□□□ 0.31
SYNE1-236ENST00000537750 KLHL10Q6JEL2 608 aa17.02■□□□□ 0.31
SYNE1-236ENST00000537750 RBM33Q96EV2 1170 aaKnown RBP17.02■□□□□ 0.31
SYNE1-236ENST00000537750 PANX2Q96RD6 677 aa17.02■□□□□ 0.31
SYNE1-236ENST00000537750 PUS7LQ9H0K6 701 aaKnown RBP17.02■□□□□ 0.31
SYNE1-236ENST00000537750 METAP2P50579 478 aaKnown RBP eCLIP17.01■□□□□ 0.31
SYNE1-236ENST00000537750 ARHGEF25Q86VW2 580 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 PPFIBP1Q86W92 1011 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 MICU3Q86XE3 530 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 MYL10Q9BUA6 226 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 CEBPAP49715 358 aaPredicted RBP17.01■□□□□ 0.31
SYNE1-236ENST00000537750 CASP7P55210 303 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 CORO7P57737 925 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 MORC3Q14149 939 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 NCAPH2Q6IBW4 605 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 KRI1Q8N9T8 703 aaKnown RBP17.01■□□□□ 0.31
SYNE1-236ENST00000537750 MLKLQ8NB16 471 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 FAM71BQ8TC56 605 aa17.01■□□□□ 0.31
SYNE1-236ENST00000537750 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.01■□□□□ 0.31
SYNE1-236ENST00000537750 CTAGE15A4D2H0 777 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 CTAGE8P0CG41 777 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 FOXO4P98177 505 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 CTAGE6Q86UF2 777 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 CTAGE4Q8IX94 777 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 PUS3Q9BZE2 481 aaKnown RBP17■□□□□ 0.31
SYNE1-236ENST00000537750 ZNF213O14771 459 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 CASP14P31944 242 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 USP49Q70CQ1 688 aa17■□□□□ 0.31
SYNE1-236ENST00000537750 CYB5R4Q7L1T6 521 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms