RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 DEXIO95424 95 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 PARP1P09874 1014 aaKnown RBP11.42□□□□□ -0.58
GGA3-201ENST00000537686 CYLC1P35663 651 aaPredicted RBP11.42□□□□□ -0.58
GGA3-201ENST00000537686 CBX1P83916 185 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 SPECC1Q5M775 1068 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 ANO1Q5XXA6 986 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 CCDC113Q9H0I3 377 aa11.42□□□□□ -0.58
GGA3-201ENST00000537686 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■□□ 15.3
GGA3-201ENST00000537686 ERICH4A6NGS2 130 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 TM6SF1Q9BZW5 370 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 GPCPD1Q9NPB8 672 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 PUF60Q9UHX1 559 aaKnown RBP11.41□□□□□ -0.58
GGA3-201ENST00000537686 PALD1Q9ULE6 856 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 RBM28Q9NW13 759 aaKnown RBP11.41□□□□□ -0.58
GGA3-201ENST00000537686 USP21Q9UK80 565 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.41□□□□□ -0.58
GGA3-201ENST00000537686 NEBLO76041 1014 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 CLCN1P35523 988 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 CTDSPL2Q05D32 466 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 DRC1Q96MC2 740 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 ASAP1Q9ULH1 1129 aa11.41□□□□□ -0.58
GGA3-201ENST00000537686 MAP2P11137 1827 aaKnown RBP11.41□□□□□ -0.58
GGA3-201ENST00000537686 VIRMAQ69YN4 1812 aaKnown RBP11.41□□□□□ -0.58
GGA3-201ENST00000537686 ERBB4Q15303 1308 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 MROH5Q6ZUA9 1318 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 POLR3GO15318 223 aaPredicted RBP11.4□□□□□ -0.58
GGA3-201ENST00000537686 MRPL12P52815 198 aaKnown RBP11.4□□□□□ -0.58
GGA3-201ENST00000537686 CTSWP56202 376 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 PTH1RQ03431 593 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 LRRC24Q50LG9 513 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 ARID5AQ03989 594 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 PRIMPOLQ96LW4 560 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 TCHPQ9BT92 498 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 MST1RQ04912 1400 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 hCG_1642624A0A1W2PR95 340 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 E7EWF7 191 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 POLD1P28340 1107 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
GGA3-201ENST00000537686 NAA15Q9BXJ9 866 aaKnown RBP11.4□□□□□ -0.58
GGA3-201ENST00000537686 ELP1O95163 1332 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 MYL5Q02045 173 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 IFFO1Q0D2I5 559 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 PLS1Q14651 629 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.59
GGA3-201ENST00000537686 CDC37L1Q7L3B6 337 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 HS2ST1Q7LGA3 356 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 LEO1Q8WVC0 666 aaPredicted RBP11.4□□□□□ -0.59
GGA3-201ENST00000537686 RBSNQ9H1K0 784 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 PAXBP1Q9Y5B6 917 aa11.4□□□□□ -0.59
GGA3-201ENST00000537686 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
GGA3-201ENST00000537686 MCM3P25205 808 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 KRT40Q6A162 431 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 FCHSD1Q86WN1 690 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 NRXN3Q9Y4C0 1643 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 KRT13P13646 458 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 CTNNA2P26232 953 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 PIK3AP1Q6ZUJ8 805 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
GGA3-201ENST00000537686 DSCC1Q9BVC3 393 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 CGNQ9P2M7 1197 aaKnown RBP11.39□□□□□ -0.59
GGA3-201ENST00000537686 KCNH3Q9ULD8 1083 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 CRB1P82279 1406 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 USP17L12C9JPN9 530 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 USP17L21D6R901 530 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 PCCAP05165 728 aaPredicted RBP11.39□□□□□ -0.59
GGA3-201ENST00000537686 ME3Q16798 604 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 EHBP1Q8NDI1 1231 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 GOPCQ9HD26 462 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 COPRSQ9NQ92 184 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 SSH2Q76I76 1423 aa11.39□□□□□ -0.59
GGA3-201ENST00000537686 GYG1P46976 350 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 SP4Q02446 784 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 AKNAD1Q5T1N1 836 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 LOC102724428A0A0B4J2F2 783 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 SIK1P57059 783 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 DYDC1Q8WWB3 177 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 CCDC42Q96M95 316 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 ZBTB1Q9Y2K1 713 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 CCDC175P0C221 793 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 PDE6AP16499 860 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 SIRT2Q8IXJ6 389 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 DNAI2Q9GZS0 605 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 STK32BQ9NY57 414 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 MAPK8IP1Q9UQF2 711 aa11.38□□□□□ -0.59
GGA3-201ENST00000537686 SOS2Q07890 1332 aaPredicted RBP11.37□□□□□ -0.59
GGA3-201ENST00000537686 POLR2DO15514 142 aaKnown RBP11.37□□□□□ -0.59
GGA3-201ENST00000537686 GADD45BO75293 160 aaPredicted RBP11.37□□□□□ -0.59
GGA3-201ENST00000537686 TFAP4Q01664 338 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 ZBTB21Q9ULJ3 1066 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 KCNJ14Q9UNX9 436 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 FAM13AO94988 1023 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 BRD1O95696 1058 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 CCDC172P0C7W6 258 aa11.37□□□□□ -0.59
GGA3-201ENST00000537686 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
GGA3-201ENST00000537686 USP37Q86T82 979 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms