RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
MRPS35-202ENST00000536569 ITPRIPQ8IWB1 547 aa16.21■□□□□ 0.19
MRPS35-202ENST00000536569 CD99L2Q8TCZ2 262 aa16.21■□□□□ 0.19
MRPS35-202ENST00000536569 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.19
MRPS35-202ENST00000536569 ZNF512BQ96KM6 892 aaPredicted RBP16.21■□□□□ 0.19
MRPS35-202ENST00000536569 PHF20L1A8MW92 1017 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
MRPS35-202ENST00000536569 GNRH1P01148 92 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 MCAMP43121 646 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 RHBDL3P58872 404 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 OS9Q13438 667 aaPredicted RBP16.2■□□□□ 0.18
MRPS35-202ENST00000536569 TNNI3KQ59H18 835 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 ZFPM1Q8IX07 1006 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 FPGT-TNNI3KV9GXZ4 949 aa16.2■□□□□ 0.18
MRPS35-202ENST00000536569 AK9Q5TCS8 1911 aa16.19■□□□□ 0.18
MRPS35-202ENST00000536569 COL2A1P02458 1487 aaPredicted RBP16.19■□□□□ 0.18
MRPS35-202ENST00000536569 TBC1D12O60347 775 aa16.19■□□□□ 0.18
MRPS35-202ENST00000536569 RLBP1P12271 317 aa16.19■□□□□ 0.18
MRPS35-202ENST00000536569 ZSCAN29Q8IWY8 852 aaPredicted RBP16.19■□□□□ 0.18
MRPS35-202ENST00000536569 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
MRPS35-202ENST00000536569 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.19■□□□□ 0.18
MRPS35-202ENST00000536569 ZNF384Q8TF68 577 aa16.19■□□□□ 0.18
MRPS35-202ENST00000536569 DOCK2Q92608 1830 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 CTNND1O60716 968 aaKnown RBP16.18■□□□□ 0.18
MRPS35-202ENST00000536569 KIF22Q14807 665 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 SH3BP5LQ7L8J4 393 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 ARMC5Q96C12 935 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 DDX4Q9NQI0 724 aaKnown RBP16.18■□□□□ 0.18
MRPS35-202ENST00000536569 PICK1Q9NRD5 415 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 RAI14Q9P0K7 980 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 LRP2BPQ9P2M1 347 aa16.18■□□□□ 0.18
MRPS35-202ENST00000536569 DDTLA6NHG4 134 aaPredicted RBP16.17■□□□□ 0.18
MRPS35-202ENST00000536569 PLCG2P16885 1265 aa16.17■□□□□ 0.18
MRPS35-202ENST00000536569 PRMT2P55345 433 aa16.17■□□□□ 0.18
MRPS35-202ENST00000536569 TMED8Q6PL24 325 aaPredicted RBP16.17■□□□□ 0.18
MRPS35-202ENST00000536569 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
MRPS35-202ENST00000536569 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
MRPS35-202ENST00000536569 FASTKD5Q7L8L6 764 aaKnown RBP16.17■□□□□ 0.18
MRPS35-202ENST00000536569 NOL10Q9BSC4 688 aaKnown RBP16.17■□□□□ 0.18
MRPS35-202ENST00000536569 BAG3O95817 575 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 PTPRAP18433 802 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 LACTBP83111 547 aaPredicted RBP16.16■□□□□ 0.18
MRPS35-202ENST00000536569 PICALMQ13492 652 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 C17orf99Q6UX52 265 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 ERC1Q8IUD2 1116 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 DBNDD2Q9BQY9 259 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
MRPS35-202ENST00000536569 PDHXO00330 501 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 PPP4CP60510 307 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 MOGSQ13724 837 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 HSP90AB4PQ58FF6 505 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 NAA16Q6N069 864 aaPredicted RBP16.15■□□□□ 0.18
MRPS35-202ENST00000536569 CEP85Q6P2H3 762 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 NBPF11Q86T75 865 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
MRPS35-202ENST00000536569 TBC1D2Q9BYX2 928 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
MRPS35-202ENST00000536569 AFG3L2Q9Y4W6 797 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 ZHX2Q9Y6X8 837 aa16.15■□□□□ 0.18
MRPS35-202ENST00000536569 A0A0G2JLL6 359 aaPredicted RBP16.14■□□□□ 0.17
MRPS35-202ENST00000536569 PRRT2Q7Z6L0 340 aaPredicted RBP16.14■□□□□ 0.17
MRPS35-202ENST00000536569 CERS3Q8IU89 383 aa16.14■□□□□ 0.17
MRPS35-202ENST00000536569 DHX36Q9H2U1 1008 aaKnown RBP16.14■□□□□ 0.17
MRPS35-202ENST00000536569 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
MRPS35-202ENST00000536569 HERC5Q9UII4 1024 aaKnown RBP16.14■□□□□ 0.17
MRPS35-202ENST00000536569 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
MRPS35-202ENST00000536569 TNRC18O15417 2968 aaPredicted RBP16.13■□□□□ 0.17
MRPS35-202ENST00000536569 CYP2E1P05181 493 aaPredicted RBP16.13■□□□□ 0.17
MRPS35-202ENST00000536569 CAP1Q01518 475 aa16.13■□□□□ 0.17
MRPS35-202ENST00000536569 GPAT2Q6NUI2 795 aa16.13■□□□□ 0.17
MRPS35-202ENST00000536569 TEX11Q8IYF3 940 aa16.13■□□□□ 0.17
MRPS35-202ENST00000536569 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.13■□□□□ 0.17
MRPS35-202ENST00000536569 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
MRPS35-202ENST00000536569 HTTP42858 3142 aa16.13■□□□□ 0.17
MRPS35-202ENST00000536569 HOXD10P28358 340 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 RPAP2Q8IXW5 612 aaPredicted RBP16.12■□□□□ 0.17
MRPS35-202ENST00000536569 PANK1Q8TE04 598 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 EAF2Q96CJ1 260 aaPredicted RBP16.12■□□□□ 0.17
MRPS35-202ENST00000536569 ZNF333Q96JL9 665 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 SNRKQ9NRH2 765 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 PI4KBQ9UBF8 816 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 MAST2Q6P0Q8 1798 aa16.12■□□□□ 0.17
MRPS35-202ENST00000536569 ZAP70P43403 619 aa16.11■□□□□ 0.17
MRPS35-202ENST00000536569 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
MRPS35-202ENST00000536569 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
MRPS35-202ENST00000536569 DOCK1Q14185 1865 aa16.11■□□□□ 0.17
MRPS35-202ENST00000536569 RBBP6Q7Z6E9 1792 aaKnown RBP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 HMMRO75330 724 aa16.1■□□□□ 0.17
MRPS35-202ENST00000536569 BCRP11274 1271 aa16.1■□□□□ 0.17
MRPS35-202ENST00000536569 METTL16Q86W50 562 aaKnown RBP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 PROCA1Q8NCQ7 364 aaPredicted RBP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
MRPS35-202ENST00000536569 CCDC8Q9H0W5 538 aaPredicted RBP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 GINM1Q9NU53 330 aa16.1■□□□□ 0.17
MRPS35-202ENST00000536569 AATFQ9NY61 560 aaKnown RBP eCLIP16.1■□□□□ 0.17
MRPS35-202ENST00000536569 CPA4Q9UI42 421 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms