RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ZNF277Q9NRM2 450 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 COL14A1Q05707 1796 aaKnown RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 PTPDC1A2A3K4 754 aa9.57□□□□□ -0.88
ABCA4-207ENST00000536513 ZYXQ15942 572 aaKnown RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 RC3H1Q5TC82 1133 aaKnown RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 ERCC4Q92889 916 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 PLA2G12BQ9BX93 195 aa9.57□□□□□ -0.88
ABCA4-207ENST00000536513 POLLQ9UGP5 575 aa9.57□□□□□ -0.88
ABCA4-207ENST00000536513 ZBTB12Q9Y330 459 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 GADD45BO75293 160 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 GOLGA8HP0CJ92 632 aa9.57□□□□□ -0.88
ABCA4-207ENST00000536513 TRIM29Q14134 588 aa9.57□□□□□ -0.88
ABCA4-207ENST00000536513 ZNF444Q8N0Y2 327 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 SECISBP2LQ93073 1101 aaKnown RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 CRNKL1Q9BZJ0 848 aaKnown RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
ABCA4-207ENST00000536513 FSD2A1L4K1 749 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 ME1P48163 572 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 ANKRD1Q15327 319 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SLC15A2Q16348 729 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SLC27A3Q5K4L6 730 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 ISM2Q6H9L7 571 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 TRMT1LQ7Z2T5 733 aaKnown RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 STRBPQ96SI9 672 aaKnown RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 PCDHAC2Q9Y5I4 1007 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 XDHP47989 1333 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 WTAPQ15007 396 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SF3B3Q15393 1217 aaKnown RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 GPR108Q9NPR9 543 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 WDR33Q9C0J8 1336 aaKnown RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SCRN1Q12765 414 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 CKAP2LQ8IYA6 745 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SMAP1Q8IYB5 467 aaPredicted RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 SH3RF3Q8TEJ3 882 aaPredicted RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 CD209Q9NNX6 404 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 ZSWIM5Q9P217 1185 aa9.56□□□□□ -0.88
ABCA4-207ENST00000536513 RGS17Q9UGC6 210 aaPredicted RBP9.56□□□□□ -0.88
ABCA4-207ENST00000536513 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 ZBTB43O43298 467 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 BTDP43251 543 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 VGLL2Q8N8G2 317 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 RASSF8Q8NHQ8 419 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 C8orf76Q96K31 380 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 NEDD4P46934 1319 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 POLRMTO00411 1230 aaKnown RBP9.55□□□□□ -0.88
ABCA4-207ENST00000536513 BAG3O95817 575 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 TOB2Q14106 344 aaPredicted RBP9.55□□□□□ -0.88
ABCA4-207ENST00000536513 CYB5R4Q7L1T6 521 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 IQCA1Q86XH1 822 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 TSPY3P0CV98 308 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 TSPY8P0CW00 308 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 MARCKSP29966 332 aaPredicted RBP9.55□□□□□ -0.88
ABCA4-207ENST00000536513 PDE6BP35913 854 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 PPARAQ07869 468 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 RAB3GAP1Q15042 981 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 USP48Q86UV5 1035 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 TBC1D16Q8TBP0 767 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 KCNJ14Q9UNX9 436 aa9.55□□□□□ -0.88
ABCA4-207ENST00000536513 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 IFIT1BQ5T764 474 aaKnown RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 ZSCAN31Q96LW9 406 aaPredicted RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 TSPY26PQ9H489 355 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 PARP4Q9UKK3 1724 aaKnown RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 KDM3BQ7LBC6 1761 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 A0A087WWV3 80 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 USP17L3A6NCW0 530 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 USP17L4A6NCW7 530 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 SPECC1Q5M775 1068 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 USP17L1Q7RTZ2 530 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 SPATA32Q96LK8 384 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 EPB41L4AQ9HCS5 686 aaPredicted RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 AHDC1Q5TGY3 1603 aaPredicted RBP9.54□□□□□ -0.88
ABCA4-207ENST00000536513 GSG1L2A8MUP6 293 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 TFAP4Q01664 338 aa9.54□□□□□ -0.88
ABCA4-207ENST00000536513 AFDNP55196 1824 aaKnown RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ZSCAN22P10073 491 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 POLD1P28340 1107 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 IARSP41252 1262 aaKnown RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 SH2B1Q9NRF2 756 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 USP40Q9NVE5 1235 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ZKSCAN5Q9Y2L8 839 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 TAF1P21675 1872 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 DOT1LQ8TEK3 1739 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 FGFR2P21802 821 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 AKNAD1Q5T1N1 836 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 RASGRP2Q7LDG7 609 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 PDILTQ8N807 584 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 CCDC94Q9BW85 323 aaPredicted RBP9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 STK38Q15208 465 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 UBE3CQ15386 1083 aa9.53□□□□□ -0.88
ABCA4-207ENST00000536513 ZSCAN23Q3MJ62 389 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms