RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 MAP4K4O95819 1239 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-205ENST00000536255 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
RPAIN-205ENST00000536255 SPRYD7Q5W111 196 aa16.41■□□□□ 0.22
RPAIN-205ENST00000536255 DCAF15Q66K64 600 aa16.41■□□□□ 0.22
RPAIN-205ENST00000536255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPAIN-205ENST00000536255 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
RPAIN-205ENST00000536255 LBX1P52954 281 aa16.4■□□□□ 0.22
RPAIN-205ENST00000536255 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
RPAIN-205ENST00000536255 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
RPAIN-205ENST00000536255 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
RPAIN-205ENST00000536255 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-205ENST00000536255 OTOFQ9HC10 1997 aa16.4■□□□□ 0.22
RPAIN-205ENST00000536255 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
RPAIN-205ENST00000536255 BAG3O95817 575 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 ZBTB48P10074 688 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-205ENST00000536255 PDE1AP54750 535 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 MAP3K9P80192 1104 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 PICALMQ13492 652 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 VGLL4Q14135 290 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 COL13A1Q5TAT6 717 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-205ENST00000536255 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 CENPQQ7L2Z9 268 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-205ENST00000536255 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 WNK4Q96J92 1243 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 WRNIP1Q96S55 665 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 PRDM10Q9NQV6 1147 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 SAGE1Q9NXZ1 904 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 TSKSQ9UJT2 592 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
RPAIN-205ENST00000536255 SREBF2Q12772 1141 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 MIGA2Q7L4E1 593 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 SH3BP5LQ7L8J4 393 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 PI4K2BQ8TCG2 481 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-205ENST00000536255 ZNF341Q9BYN7 854 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 ELP3Q9H9T3 547 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPAIN-205ENST00000536255 CSADQ9Y600 493 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
RPAIN-205ENST00000536255 PLCG2P16885 1265 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 CYP7A1P22680 504 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 PPP4CP60510 307 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 LRRFIP1Q32MZ4 808 aaKnown RBP16.37■□□□□ 0.21
RPAIN-205ENST00000536255 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 ZSCAN29Q8IWY8 852 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-205ENST00000536255 TEX11Q8IYF3 940 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 MAGEB6Q8N7X4 407 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 RNF186Q9NXI6 227 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
RPAIN-205ENST00000536255 COL2A1P02458 1487 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 DDTLA6NHG4 134 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 MANSC4A6NHS7 340 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 GJA5P36382 358 aa16.36■□□□□ 0.21
RPAIN-205ENST00000536255 TM4SF4P48230 202 aa16.36■□□□□ 0.21
RPAIN-205ENST00000536255 SLC9C2Q5TAH2 1124 aa16.36■□□□□ 0.21
RPAIN-205ENST00000536255 ZKSCAN4Q969J2 545 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 EDC3Q96F86 508 aaKnown RBP16.36■□□□□ 0.21
RPAIN-205ENST00000536255 SNCAIPQ9Y6H5 919 aa16.36■□□□□ 0.21
RPAIN-205ENST00000536255 TRPA1O75762 1119 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 PDE6AP16499 860 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 KBTBD3Q8NAB2 608 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-205ENST00000536255 OSBPL3Q9H4L5 887 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 ZNF112Q9UJU3 913 aa16.35■□□□□ 0.21
RPAIN-205ENST00000536255 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
RPAIN-205ENST00000536255 INHBEP58166 350 aa16.34■□□□□ 0.21
RPAIN-205ENST00000536255 MIGA1Q8NAN2 632 aa16.34■□□□□ 0.21
RPAIN-205ENST00000536255 CNKSR2Q8WXI2 1034 aa16.34■□□□□ 0.21
RPAIN-205ENST00000536255 LAMB1P07942 1786 aa16.33■□□□□ 0.21
RPAIN-205ENST00000536255 ZFYP08048 801 aaPredicted RBP16.33■□□□□ 0.2
RPAIN-205ENST00000536255 INPP5BP32019 993 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 DYNLL1P63167 89 aaKnown RBP16.33■□□□□ 0.2
RPAIN-205ENST00000536255 MAP3K10Q02779 954 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 UBE3CQ15386 1083 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 ERO1BQ86YB8 467 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 TGFBRAP1Q8WUH2 860 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 OTUD5Q96G74 571 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 AK9Q5TCS8 1911 aa16.33■□□□□ 0.2
RPAIN-205ENST00000536255 FLT1P17948 1338 aa16.32■□□□□ 0.2
RPAIN-205ENST00000536255 ADD2P35612 726 aa16.32■□□□□ 0.2
RPAIN-205ENST00000536255 NOL9Q5SY16 702 aaKnown RBP16.32■□□□□ 0.2
RPAIN-205ENST00000536255 MAPKAPK5Q8IW41 473 aa16.32■□□□□ 0.2
RPAIN-205ENST00000536255 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
RPAIN-205ENST00000536255 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
RPAIN-205ENST00000536255 TESPA1A2RU30 521 aaPredicted RBP16.31■□□□□ 0.2
RPAIN-205ENST00000536255 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms