RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 GBP3Q9H0R5 595 aa7.93□□□□□ -1.14
CPSF7-215ENST00000536145 RAI14Q9P0K7 980 aa7.93□□□□□ -1.14
CPSF7-215ENST00000536145 NDUFB9Q9Y6M9 179 aa7.93□□□□□ -1.14
CPSF7-215ENST00000536145 ECM29Q5VYK3 1845 aa7.93□□□□□ -1.14
CPSF7-215ENST00000536145 A0A087WUV0 522 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 LRRIQ3A6PVS8 624 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 M0R2C6 588 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 RNF113AO15541 343 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 SHOX2O60902 331 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 ERLIN1O75477 346 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 CCDC175P0C221 793 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 LTKP29376 864 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 TNNT3P45378 269 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 ADKP55263 362 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 GSCP56915 257 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 GNL2Q13823 731 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 LONRF3Q496Y0 759 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 PLEKHO1Q53GL0 409 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 CT47A1Q5JQC4 288 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 TTLL5Q6EMB2 1281 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 ZNF530Q6P9A1 599 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 OLFM4Q6UX06 510 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 DDX46Q7L014 1031 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 EFCAB13Q8IY85 973 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 FAM177A1Q8N128 213 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 GOLGA6L1Q8N7Z2 621 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 TRIML1Q8N9V2 468 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 MLKLQ8NB16 471 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 CNNM3Q8NE01 707 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 NGDNQ8NEJ9 315 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 SPATA20Q8TB22 786 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 CCDC12Q8WUD4 166 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 PPM1EQ8WY54 764 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 ZFP91Q96JP5 570 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 DESI2Q9BSY9 194 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 NAA15Q9BXJ9 866 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 IRX2Q9BZI1 471 aaPredicted RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 SUGCTQ9HAC7 445 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 MED4Q9NPJ6 270 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 GJB4Q9NTQ9 266 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 WDR17Q8IZU2 1322 aa7.92□□□□□ -1.14
CPSF7-215ENST00000536145 PARP4Q9UKK3 1724 aaKnown RBP7.92□□□□□ -1.14
CPSF7-215ENST00000536145 SOWAHDA6NJG2 315 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 AKR1B15C9JRZ8 316 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 FOXN1O15353 648 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 PRR29P0C7W0 189 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 ERCC5P28715 1186 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MARCKSP29966 332 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 PSEN1P49768 467 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 TEFQ10587 303 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MCM6Q14566 821 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MCTP2Q6DN12 878 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 SYNE3Q6ZMZ3 975 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MMS22LQ6ZRQ5 1243 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 SLC35F6Q8N357 371 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 LTV1Q96GA3 475 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 CEP89Q96ST8 783 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MYCBPQ99417 103 aaPredicted RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 PAG1Q9NWQ8 432 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 PUF60Q9UHX1 559 aaKnown RBP7.91□□□□□ -1.14
CPSF7-215ENST00000536145 TBX22Q9Y458 520 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 ITIH6Q6UXX5 1313 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 GLI3P10071 1580 aa7.91□□□□□ -1.14
CPSF7-215ENST00000536145 MST1RQ04912 1400 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 NID2Q14112 1375 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 ZMYM6O95789 1325 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CDHR2Q9BYE9 1310 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 KLF18A0A0U1RQI7 1052 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 SH2B2O14492 632 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-215ENST00000536145 SEMA3EO15041 775 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 PRC1O43663 620 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 MFAP3LO75121 409 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 PPFIA3O75145 1194 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 PTPREP23469 700 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 PLCD1P51178 756 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 USP14P54578 494 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 EIF5P55010 431 aaKnown RBP7.9□□□□□ -1.14
CPSF7-215ENST00000536145 FOXO4P98177 505 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CUL4BQ13620 913 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CDKAL1Q5VV42 579 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CCDC102BQ68D86 513 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 KRT40Q6A162 431 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 MPRIPQ6WCQ1 1025 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CHST3Q7LGC8 479 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 SH3RF1Q7Z6J0 888 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 TADA2BQ86TJ2 420 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 STK11IPQ8N1F8 1099 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 JMYQ8N9B5 988 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CTCFLQ8NI51 663 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-215ENST00000536145 OSBP2Q969R2 916 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CCDC51Q96ER9 411 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 CLIC6Q96NY7 704 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 MYO1AQ9UBC5 1043 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 ADD3Q9UEY8 706 aaKnown RBP7.9□□□□□ -1.14
CPSF7-215ENST00000536145 FBXO2Q9UK22 296 aaPredicted RBP7.9□□□□□ -1.14
CPSF7-215ENST00000536145 KCNH3Q9ULD8 1083 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 HPCAL4Q9UM19 191 aa7.9□□□□□ -1.14
CPSF7-215ENST00000536145 NFE2L3Q9Y4A8 694 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms