RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SLIT1O75093 1534 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 DIP2AQ14689 1571 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 NINLQ9Y2I6 1382 aa6.44□□□□□ -1.38
YBX3-205ENST00000536107 PREX2Q70Z35 1606 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 RTEL1-TNFRSF6BF6WH68 1400 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 FMN1Q68DA7 1419 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 ERVK-7P63135 1459 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 TIAF1O95411 115 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 NUTM2GQ5VZR2 741 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 KSR1Q8IVT5 923 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 CEP120Q8N960 986 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 SMG8Q8ND04 991 aaKnown RBP6.43□□□□□ -1.38
YBX3-205ENST00000536107 TMPRSS13Q9BYE2 586 aa6.43□□□□□ -1.38
YBX3-205ENST00000536107 NCOA3Q9Y6Q9 1424 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 ADMP35318 185 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 NBPF8Q3BBV2 869 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 COX20Q5RI15 118 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 ANKMY2Q8IV38 441 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 C12orf50Q8NA57 414 aaPredicted RBP6.42□□□□□ -1.38
YBX3-205ENST00000536107 POM121Q96HA1 1249 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 TBC1D32Q96NH3 1257 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
YBX3-205ENST00000536107 INO80Q9ULG1 1556 aaPredicted RBP6.42□□□□□ -1.38
YBX3-205ENST00000536107 KDM5AP29375 1690 aaKnown RBP6.42□□□□□ -1.38
YBX3-205ENST00000536107 PTCH1Q13635 1447 aa6.42□□□□□ -1.38
YBX3-205ENST00000536107 KCNQ2O43526 872 aa6.41□□□□□ -1.38
YBX3-205ENST00000536107 ZNF865P0CJ78 1059 aaPredicted RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 EZH2Q15910 746 aaKnown RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 ZNF792Q3KQV3 632 aa6.41□□□□□ -1.38
YBX3-205ENST00000536107 TTC39BQ5VTQ0 682 aaPredicted RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 ATG4DQ86TL0 474 aaPredicted RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 ETFBKMTQ8IXQ9 262 aa6.41□□□□□ -1.38
YBX3-205ENST00000536107 SLC38A3Q99624 504 aa6.41□□□□□ -1.38
YBX3-205ENST00000536107 PRKAG2Q9UGJ0 569 aa6.41□□□□□ -1.38
YBX3-205ENST00000536107 MAFBQ9Y5Q3 323 aaPredicted RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 ZNF644Q9H582 1327 aaPredicted RBP6.41□□□□□ -1.38
YBX3-205ENST00000536107 ASXL1Q8IXJ9 1541 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 ADGBQ8N7X0 1667 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 FAM196BA6NMK8 535 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 ARL4DP49703 201 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 PRELPP51888 382 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 PLCL1Q15111 1095 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 TMEM132AQ24JP5 1023 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 CDPF1Q6NVV7 123 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 UNC5CLQ8IV45 518 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 BHLHE22Q8NFJ8 381 aaPredicted RBP6.4□□□□□ -1.38
YBX3-205ENST00000536107 FBLIM1Q8WUP2 373 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 EZH1Q92800 747 aaPredicted RBP6.4□□□□□ -1.38
YBX3-205ENST00000536107 GATA6Q92908 595 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 FAM13BQ9NYF5 915 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 TFIP11Q9UBB9 837 aaKnown RBP6.4□□□□□ -1.38
YBX3-205ENST00000536107 SLC5A6Q9Y289 635 aa6.4□□□□□ -1.38
YBX3-205ENST00000536107 NCANO14594 1321 aa6.4□□□□□ -1.39
YBX3-205ENST00000536107 CCNB3Q8WWL7 1395 aa6.4□□□□□ -1.39
YBX3-205ENST00000536107 GPATCH8Q9UKJ3 1502 aaKnown RBP6.4□□□□□ -1.39
YBX3-205ENST00000536107 MAST1Q9Y2H9 1570 aa6.4□□□□□ -1.39
YBX3-205ENST00000536107 UBR1Q8IWV7 1749 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 FAM170BA6NMN3 283 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L15C9J2P7 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L10C9JJH3 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L13C9JLJ4 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L12C9JPN9 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L11C9JVI0 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L21D6R901 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L18D6R9N7 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L22D6RA61 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L17D6RBQ6 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L19D6RCP7 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L20D6RJB6 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 PRRG2O14669 202 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 RAD21O60216 631 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP11P51784 963 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 C19orf57Q0VDD7 668 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 USP17L24Q0WX57 530 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 NCAPG2Q86XI2 1143 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 BCL7CQ8WUZ0 217 aaPredicted RBP6.39□□□□□ -1.39
YBX3-205ENST00000536107 SLC7A3Q8WY07 619 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 FAM168AQ92567 244 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 ABI2Q9NYB9 513 aaPredicted RBP6.39□□□□□ -1.39
YBX3-205ENST00000536107 FNDC3AQ9Y2H6 1198 aaKnown RBP6.39□□□□□ -1.39
YBX3-205ENST00000536107 CAMSAP2Q08AD1 1489 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 RALGAPBQ86X10 1494 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 ARHGAP35Q9NRY4 1499 aa6.39□□□□□ -1.39
YBX3-205ENST00000536107 A6NJR5 290 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 BRD2P25440 801 aaKnown RBP6.38□□□□□ -1.39
YBX3-205ENST00000536107 CYP27A1Q02318 531 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 IDI1Q13907 227 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 LILRA6Q6PI73 481 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 STK11IPQ8N1F8 1099 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 YIPF2Q9BWQ6 316 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 UNC13BO14795 1591 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 MROH1Q8NDA8 1641 aa6.38□□□□□ -1.39
YBX3-205ENST00000536107 TET3O43151 1660 aa6.37□□□□□ -1.39
YBX3-205ENST00000536107 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms