RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 SLC34A2O95436 690 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 TRIM27P14373 513 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 PLCG2P16885 1265 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 FCGRTP55899 365 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 FAM198AQ9UFP1 575 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 ZNF112Q9UJU3 913 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 ZHX2Q9Y6X8 837 aa16.27■□□□□ 0.2
CLSTN3-205ENST00000535452 LAMB1P07942 1786 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 GAKO14976 1311 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 CTNND1O60716 968 aaKnown RBP16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 PSMC4P43686 418 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 UBXN2AP68543 259 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 PABPC4Q13310 644 aaKnown RBP eCLIP16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 GADL1Q6ZQY3 521 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 NKX2-3Q8TAU0 364 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 FAM163AQ96GL9 167 aaPredicted RBP16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 TRIM47Q96LD4 638 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.193e-6■■■□□ 18.9
CLSTN3-205ENST00000535452 CPA4Q9UI42 421 aa16.26■□□□□ 0.19
CLSTN3-205ENST00000535452 ECM2O94769 699 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 MYCP01106 439 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 MECOMQ03112 1051 aa16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 ITPRIPQ8IWB1 547 aa16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 ZNF333Q96JL9 665 aa16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 TBC1D2Q9BYX2 928 aa16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 AS3MTQ9HBK9 375 aa16.25■□□□□ 0.19
CLSTN3-205ENST00000535452 MS4A1P11836 297 aa16.24■□□□□ 0.19
CLSTN3-205ENST00000535452 MYPNQ86TC9 1320 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 GPR75-ASB3A0A0A6YYF3 556 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 IGSF3O75054 1194 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 SURF6O75683 361 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 BCAR3O75815 825 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 NAA16Q6N069 864 aaPredicted RBP16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 C17orf99Q6UX52 265 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 CRACR2BQ8N4Y2 399 aaPredicted RBP16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
CLSTN3-205ENST00000535452 TRIM75PA6NK02 468 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 NPM3O75607 178 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 PTPRAP18433 802 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 CERS3Q8IU89 383 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 TMEM57Q8N5G2 664 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 DHX36Q9H2U1 1008 aaKnown RBP16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 GPR108Q9NPR9 543 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 SLC45A1Q9Y2W3 748 aa16.22■□□□□ 0.19
CLSTN3-205ENST00000535452 PDE4DIPQ5VU43 2346 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 A0A0G2JLL6 359 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 TNPO2O14787 897 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 HLA-DOAP06340 250 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 EN2P19622 333 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 ARID4AP29374 1257 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 GRK4P32298 578 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 PRRT2Q7Z6L0 340 aaPredicted RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 ERC1Q8IUD2 1116 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 SH3TC2Q8TF17 1288 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 COA7Q96BR5 231 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 PCDH10Q9P2E7 1040 aa16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 HERC5Q9UII4 1024 aaKnown RBP16.21■□□□□ 0.19
CLSTN3-205ENST00000535452 MYH2Q9UKX2 1941 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 TBC1D12O60347 775 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 OSBPP22059 807 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 ZFPM1Q8IX07 1006 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 CCAR1Q8IX12 1150 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 SLAIN1Q8ND83 568 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 NSUN4Q96CB9 384 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 ARHGAP39Q9C0H5 1083 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 PI4KBQ9UBF8 816 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
CLSTN3-205ENST00000535452 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 DDTLA6NHG4 134 aaPredicted RBP16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 CYP2C8P10632 490 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 TNNI3KQ59H18 835 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 TBC1D9Q6ZT07 1266 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 TMOD4Q9NZQ9 345 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 AGTPBP1Q9UPW5 1226 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 AFG3L2Q9Y4W6 797 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 FPGT-TNNI3KV9GXZ4 949 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 DOCK2Q92608 1830 aa16.19■□□□□ 0.18
CLSTN3-205ENST00000535452 PHF20L1A8MW92 1017 aa16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 ATP8B2P98198 1209 aa16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 ZNF280CQ8ND82 737 aa16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 HTATIP2Q9BUP3 242 aa16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 AATFQ9NY61 560 aaKnown RBP eCLIP16.18■□□□□ 0.18
CLSTN3-205ENST00000535452 ATRNL1Q5VV63 1379 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 USP17L5A8MUK1 530 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 ASNSP08243 561 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 CAPN2P17655 700 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 MCAMP43121 646 aa16.17■□□□□ 0.18
CLSTN3-205ENST00000535452 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms