RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ADD2P35612 726 aa27.54■■■□□ 2
SFSWAP-204ENST00000535399 RASAL3Q86YV0 1011 aa27.54■■■□□ 2
SFSWAP-204ENST00000535399 CCDC102AQ96A19 550 aa27.54■■■□□ 2
SFSWAP-204ENST00000535399 AOC2O75106 756 aa27.53■■■□□ 2
SFSWAP-204ENST00000535399 IREB2P48200 963 aaKnown RBP27.53■■■□□ 2
SFSWAP-204ENST00000535399 PDE1AP54750 535 aa27.53■■■□□ 2
SFSWAP-204ENST00000535399 SLFNL1Q499Z3 407 aa27.53■■■□□ 2
SFSWAP-204ENST00000535399 HOOK2Q96ED9 719 aa27.53■■■□□ 2
SFSWAP-204ENST00000535399 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.53■■■□□ 2
SFSWAP-204ENST00000535399 ATRNL1Q5VV63 1379 aa27.52■■■□□ 2
SFSWAP-204ENST00000535399 DDTLA6NHG4 134 aaPredicted RBP27.52■■■□□ 2
SFSWAP-204ENST00000535399 CHGBP05060 677 aa27.52■■■□□ 2
SFSWAP-204ENST00000535399 KBTBD3Q8NAB2 608 aa27.52■■■□□ 2
SFSWAP-204ENST00000535399 RIOK1Q9BRS2 568 aaKnown RBP27.52■■■□□ 2
SFSWAP-204ENST00000535399 OSBPL5Q9H0X9 879 aaPredicted RBP27.52■■■□□ 2
SFSWAP-204ENST00000535399 UNCXA6NJT0 531 aa27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 MIGA2Q7L4E1 593 aa27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 CERS3Q8IU89 383 aa27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 TGFBRAP1Q8WUH2 860 aa27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 CLMNQ96JQ2 1002 aa27.51■■□□□ 1.99
SFSWAP-204ENST00000535399 MAP2K2P36507 400 aa27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 NOGQ13253 232 aa27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 DCAF15Q66K64 600 aa27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 ZSCAN29Q8IWY8 852 aaPredicted RBP27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 CSRNP1Q96S65 589 aa27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 ZIC5Q96T25 663 aa27.5■■□□□ 1.99
SFSWAP-204ENST00000535399 MAGEB6P1A0A0J9YX57 407 aa27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 UBE3CQ15386 1083 aa27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 MAPKAPK5Q8IW41 473 aa27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 ANKRD13AQ8IZ07 590 aa27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 PCNTO95613 3336 aa27.49■■□□□ 1.99
SFSWAP-204ENST00000535399 FLT1P17948 1338 aa27.48■■□□□ 1.99
SFSWAP-204ENST00000535399 MAP3K9P80192 1104 aa27.48■■□□□ 1.99
SFSWAP-204ENST00000535399 ZNF341Q9BYN7 854 aa27.48■■□□□ 1.99
SFSWAP-204ENST00000535399 COL2A1P02458 1487 aaPredicted RBP27.48■■□□□ 1.99
SFSWAP-204ENST00000535399 MAP3K10Q02779 954 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 ZSCAN25Q6NSZ9 544 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 PLEKHM2Q8IWE5 1019 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 SLC10A4Q96EP9 437 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 ZNF112Q9UJU3 913 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 THSD7BQ9C0I4 1608 aa27.47■■□□□ 1.99
SFSWAP-204ENST00000535399 CENPBP07199 599 aaPredicted RBP27.46■■□□□ 1.99
SFSWAP-204ENST00000535399 VGLL4Q14135 290 aa27.46■■□□□ 1.99
SFSWAP-204ENST00000535399 WRNIP1Q96S55 665 aa27.46■■□□□ 1.99
SFSWAP-204ENST00000535399 SLURP2P0DP57 97 aa27.45■■□□□ 1.98
SFSWAP-204ENST00000535399 LCORLQ8N3X6 602 aa27.45■■□□□ 1.98
SFSWAP-204ENST00000535399 USP5P45974 858 aa27.44■■□□□ 1.98
SFSWAP-204ENST00000535399 KIF23Q02241 960 aaPredicted RBP27.44■■□□□ 1.98
SFSWAP-204ENST00000535399 SPRYD7Q5W111 196 aa27.44■■□□□ 1.98
SFSWAP-204ENST00000535399 OSBPL3Q9H4L5 887 aa27.44■■□□□ 1.98
SFSWAP-204ENST00000535399 WBP1LQ9NX94 342 aa27.44■■□□□ 1.98
SFSWAP-204ENST00000535399 RNF113AO15541 343 aaKnown RBP27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 MBD4O95243 580 aa27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 INPP5BP32019 993 aa27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 WNK4Q96J92 1243 aa27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 CRNKL1Q9BZJ0 848 aaKnown RBP27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 DHX36Q9H2U1 1008 aaKnown RBP27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 ARMT1Q9H993 441 aa27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 ELP3Q9H9T3 547 aa27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.43■■□□□ 1.98
SFSWAP-204ENST00000535399 PHF20L1A8MW92 1017 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 TBC1D12O60347 775 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 ZFYP08048 801 aaPredicted RBP27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 PDE4AP27815 886 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 GJA5P36382 358 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 MAP2K1Q02750 393 aaPredicted RBP27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 ZKSCAN4Q969J2 545 aaPredicted RBP27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 PUS7LQ9H0K6 701 aaKnown RBP27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 SAP30BPQ9UHR5 308 aaKnown RBP27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 CSADQ9Y600 493 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 SNCAIPQ9Y6H5 919 aa27.42■■□□□ 1.98
SFSWAP-204ENST00000535399 HSPA1AP0DMV8 641 aaKnown RBP27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 HSPA1BP0DMV9 641 aaKnown RBP27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 MKRN3Q13064 507 aaKnown RBP27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 APPBP2Q92624 585 aa27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 OSBP2Q969R2 916 aa27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 FSD1Q9BTV5 496 aa27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 PI4KBQ9UBF8 816 aa27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 PALD1Q9ULE6 856 aa27.41■■□□□ 1.98
SFSWAP-204ENST00000535399 CNKSR2Q8WXI2 1034 aa27.4■■□□□ 1.98
SFSWAP-204ENST00000535399 EVI5LQ96CN4 794 aa27.4■■□□□ 1.98
SFSWAP-204ENST00000535399 LRRFIP1Q32MZ4 808 aaKnown RBP27.39■■□□□ 1.98
SFSWAP-204ENST00000535399 NOL9Q5SY16 702 aaKnown RBP27.39■■□□□ 1.98
SFSWAP-204ENST00000535399 METTL16Q86W50 562 aaKnown RBP27.39■■□□□ 1.98
SFSWAP-204ENST00000535399 SDR42E1Q8WUS8 393 aa27.39■■□□□ 1.98
SFSWAP-204ENST00000535399 OTOFQ9HC10 1997 aa27.39■■□□□ 1.97
SFSWAP-204ENST00000535399 FAM196BA6NMK8 535 aa27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 PRKAB2O43741 272 aa27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 ZBTB48P10074 688 aaPredicted RBP27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 AIDAQ96BJ3 306 aa27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 OPTNQ96CV9 577 aa27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.38■■□□□ 1.97
SFSWAP-204ENST00000535399 SPDYE5A6NIY4 337 aa27.37■■□□□ 1.97
SFSWAP-204ENST00000535399 STRBPQ96SI9 672 aaKnown RBP27.37■■□□□ 1.97
SFSWAP-204ENST00000535399 DCP1AQ9NPI6 582 aaPredicted RBP27.37■■□□□ 1.97
SFSWAP-204ENST00000535399 HERC5Q9UII4 1024 aaKnown RBP27.37■■□□□ 1.97
SFSWAP-204ENST00000535399 AK9Q5TCS8 1911 aa27.37■■□□□ 1.97
SFSWAP-204ENST00000535399 CDK5RAP2Q96SN8 1893 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms