RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 ESR2Q92731 530 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 ZSWIM5Q9P217 1185 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 NAV1Q8NEY1 1877 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 CCDC93Q567U6 631 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 AMOTL1Q8IY63 956 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 RTKN2Q8IZC4 609 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 INCENPQ9NQS7 918 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 GPHNQ9NQX3 736 aaPredicted RBP27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 TACC3Q9Y6A5 838 aa27.96■■■□□ 2.07
PTPMT1-205ENST00000534775 C21orf2O43822 256 aa27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 DHX16O60231 1041 aaKnown RBP27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 DPEP1P16444 411 aa27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 TGFB2P61812 414 aa27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 FKBP1AP62942 108 aaKnown RBP27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 R3HDM1Q15032 1099 aaKnown RBP27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 TMEM67Q5HYA8 995 aa27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 DBNDD1Q9H9R9 158 aa27.95■■■□□ 2.06
PTPMT1-205ENST00000534775 GOLGA8BA8MQT2 603 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 FGRP09769 529 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 ZSCAN22P10073 491 aaPredicted RBP27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 LIFRP42702 1097 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 HMGN5P82970 282 aaKnown RBP27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 KIAA2012Q0VF49 1180 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 IGDCC4Q8TDY8 1250 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 MCM9Q9NXL9 1143 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 BRPF3Q9ULD4 1205 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 KIF3AQ9Y496 699 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 CDK5RAP2Q96SN8 1893 aa27.94■■■□□ 2.06
PTPMT1-205ENST00000534775 ERICH2A1L162 156 aa27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 IFIT3O14879 490 aaKnown RBP27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 ECE2O60344 883 aa27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 NT5C2P49902 561 aa27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 LARP1BQ659C4 914 aaKnown RBP27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 SGMS1Q86VZ5 419 aa27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 SMARCC2Q8TAQ2 1214 aa27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 MKRN1Q9UHC7 482 aaKnown RBP27.93■■■□□ 2.06
PTPMT1-205ENST00000534775 KCNA3P22001 575 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 CCT2P78371 535 aaKnown RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 STRIP1Q5VSL9 837 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 FOXD4L5Q5VV16 416 aaPredicted RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 FOXD4L4Q8WXT5 416 aaPredicted RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 SOGA3Q5TF21 947 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 TEX11Q8IYF3 940 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 TMTC2Q8N394 836 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 CERS5Q8N5B7 392 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 NSUN7Q8NE18 718 aaKnown RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 NKX2-3Q8TAU0 364 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 LY9Q9HBG7 655 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 TTF2Q9UNY4 1162 aaKnown RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 ATF5Q9Y2D1 282 aaPredicted RBP27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 ATP6V1DQ9Y5K8 247 aa27.92■■■□□ 2.06
PTPMT1-205ENST00000534775 CYP2D7A0A087X1C5 515 aa27.91■■■□□ 2.06
PTPMT1-205ENST00000534775 NFXL1Q6ZNB6 911 aa27.91■■■□□ 2.06
PTPMT1-205ENST00000534775 STK11IPQ8N1F8 1099 aa27.91■■■□□ 2.06
PTPMT1-205ENST00000534775 UBAC1Q9BSL1 405 aa27.91■■■□□ 2.06
PTPMT1-205ENST00000534775 DAGLAQ9Y4D2 1042 aa27.91■■■□□ 2.06
PTPMT1-205ENST00000534775 FOCADQ5VW36 1801 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 ORC4O43929 436 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 PDE4BQ07343 736 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 AOC3Q16853 763 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 FAM184AQ8NB25 1140 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 TGFBRAP1Q8WUH2 860 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 PSMD1Q99460 953 aa27.9■■■□□ 2.06
PTPMT1-205ENST00000534775 JAK2O60674 1132 aa27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 WTAPQ15007 396 aa27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 NCOA5Q9HCD5 579 aaKnown RBP27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 HPS5Q9UPZ3 1129 aa27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 MTMR6Q9Y217 621 aa27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.89■■■□□ 2.06
PTPMT1-205ENST00000534775 PTPDC1A2A3K4 754 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 CCDC69A6NI79 296 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 PPIP5K2O43314 1243 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 F13A1P00488 732 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 C12orf60Q5U649 245 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 MCTP1Q6DN14 999 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 APOA5Q6Q788 366 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 SYNE3Q6ZMZ3 975 aa27.89■■■□□ 2.05
PTPMT1-205ENST00000534775 ZNF646O15015 1829 aaPredicted RBP27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 ROBO3Q96MS0 1386 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 USP17L3A6NCW0 530 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 USP17L4A6NCW7 530 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 RHBDL3P58872 404 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 DDX60LQ5H9U9 1706 aaKnown RBP27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 HHIPL2Q6UWX4 724 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 USP17L1Q7RTZ2 530 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 PIM2Q9P1W9 311 aa27.88■■■□□ 2.05
PTPMT1-205ENST00000534775 VPS37CA5D8V6 355 aaPredicted RBP27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 F8W031 263 aaPredicted RBP27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 ZBTB43O43298 467 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 CTDNEP1O95476 244 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 USP17L8P0C7I0 530 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 METAP2P50579 478 aaKnown RBP eCLIP27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 IQCA1Q86XH1 822 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 TEKT1Q969V4 418 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 VPS33BQ9H267 617 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 SLC12A7Q9Y666 1083 aa27.87■■■□□ 2.05
PTPMT1-205ENST00000534775 SCN9AQ15858 1988 aa27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 CPLX1O14810 134 aa27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 RANBP6O60518 1105 aaKnown RBP27.86■■■□□ 2.05
PTPMT1-205ENST00000534775 CYP2D6P10635 497 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms