RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 TIMM10P62072 90 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 MTX1Q13505 466 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 SPTY2D1Q68D10 685 aaPredicted RBP15.52■□□□□ 0.08
USF1-211ENST00000534633 ZFPM1Q8IX07 1006 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
USF1-211ENST00000534633 FAM163AQ96GL9 167 aaPredicted RBP15.52■□□□□ 0.08
USF1-211ENST00000534633 ABCF2Q9UG63 623 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 SRRDQ9UH36 339 aa15.52■□□□□ 0.08
USF1-211ENST00000534633 A0A1B0GUL7 405 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 PHF20L1A8MW92 1017 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 SRGAP3O43295 1099 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 CTGFP29279 349 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 PSMC4P43686 418 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 MAP3K10Q02779 954 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 MVPQ14764 893 aaKnown RBP15.51■□□□□ 0.07
USF1-211ENST00000534633 ATF7IPQ6VMQ6 1270 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 TRIM47Q96LD4 638 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 PARK7Q99497 189 aaKnown RBP15.51■□□□□ 0.07
USF1-211ENST00000534633 PICK1Q9NRD5 415 aa15.51■□□□□ 0.07
USF1-211ENST00000534633 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
USF1-211ENST00000534633 TFCP2Q12800 502 aa15.5■□□□□ 0.07
USF1-211ENST00000534633 HABP4Q5JVS0 413 aaKnown RBP15.5■□□□□ 0.07
USF1-211ENST00000534633 GPAT2Q6NUI2 795 aa15.5■□□□□ 0.07
USF1-211ENST00000534633 FASTKD5Q7L8L6 764 aaKnown RBP15.5■□□□□ 0.07
USF1-211ENST00000534633 ZSCAN29Q8IWY8 852 aaPredicted RBP15.5■□□□□ 0.07
USF1-211ENST00000534633 XAGE2Q96GT9 111 aa15.5■□□□□ 0.07
USF1-211ENST00000534633 RCAN3Q9UKA8 241 aa15.5■□□□□ 0.07
USF1-211ENST00000534633 A0A0G2JLL6 359 aaPredicted RBP15.49■□□□□ 0.07
USF1-211ENST00000534633 DDTLA6NHG4 134 aaPredicted RBP15.49■□□□□ 0.07
USF1-211ENST00000534633 FMNL1O95466 1100 aaPredicted RBP15.49■□□□□ 0.07
USF1-211ENST00000534633 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
USF1-211ENST00000534633 BCRP11274 1271 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 PTPRAP18433 802 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 OSBPP22059 807 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 BTDP43251 543 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 ERICH6Q7L0X2 663 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 SH3BP5LQ7L8J4 393 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 PRRT2Q7Z6L0 340 aaPredicted RBP15.49■□□□□ 0.07
USF1-211ENST00000534633 CLUAP1Q96AJ1 413 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 ZHX2Q9Y6X8 837 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 MAST2Q6P0Q8 1798 aa15.49■□□□□ 0.07
USF1-211ENST00000534633 CDK5RAP2Q96SN8 1893 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 MYPNQ86TC9 1320 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 GPR75-ASB3A0A0A6YYF3 556 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 IPO8O15397 1037 aaKnown RBP15.48■□□□□ 0.07
USF1-211ENST00000534633 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
USF1-211ENST00000534633 NPM3O75607 178 aaKnown RBP15.48■□□□□ 0.07
USF1-211ENST00000534633 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
USF1-211ENST00000534633 RLBP1P12271 317 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 GRK4P32298 578 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 MECOMQ03112 1051 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 RAET1EQ8TD07 263 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 DDX4Q9NQI0 724 aaKnown RBP15.48■□□□□ 0.07
USF1-211ENST00000534633 SLC45A1Q9Y2W3 748 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 AFG3L2Q9Y4W6 797 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 LOC285556D6RIA3 1793 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 DOCK3Q8IZD9 2030 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 CEP290O15078 2479 aa15.48■□□□□ 0.07
USF1-211ENST00000534633 FOCADQ5VW36 1801 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 COL2A1P02458 1487 aaPredicted RBP15.47■□□□□ 0.07
USF1-211ENST00000534633 MAP4K4O95819 1239 aaPredicted RBP15.47■□□□□ 0.07
USF1-211ENST00000534633 CYP2C8P10632 490 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 FCGRTP55899 365 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 RHBDL3P58872 404 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 PICALMQ13492 652 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 MTFR1Q15390 333 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 NEUROD6Q96NK8 337 aa15.47■□□□□ 0.07
USF1-211ENST00000534633 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
USF1-211ENST00000534633 TBC1D12O60347 775 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 LDHCP07864 332 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 GSTO1P78417 241 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 GORABQ5T7V8 394 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 GADL1Q6ZQY3 521 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 TMEM57Q8N5G2 664 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 SPATA5Q8NB90 893 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 NKX2-3Q8TAU0 364 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 ZNF384Q8TF68 577 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 HMG20BQ9P0W2 317 aa15.46■□□□□ 0.07
USF1-211ENST00000534633 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
USF1-211ENST00000534633 GNAI2P04899 355 aa15.45■□□□□ 0.06
USF1-211ENST00000534633 ARID4AP29374 1257 aaPredicted RBP15.45■□□□□ 0.06
USF1-211ENST00000534633 PRKCZQ05513 592 aa15.45■□□□□ 0.06
USF1-211ENST00000534633 NSUN4Q96CB9 384 aaKnown RBP15.45■□□□□ 0.06
USF1-211ENST00000534633 SHISA4Q96DD7 197 aa15.45■□□□□ 0.06
USF1-211ENST00000534633 SIPA1L1O43166 1804 aa15.45■□□□□ 0.06
USF1-211ENST00000534633 GJB1P08034 283 aa15.44■□□□□ 0.06
USF1-211ENST00000534633 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
USF1-211ENST00000534633 UBXN2AP68543 259 aa15.44■□□□□ 0.06
USF1-211ENST00000534633 SLAIN1Q8ND83 568 aa15.44■□□□□ 0.06
USF1-211ENST00000534633 OSBPL5Q9H0X9 879 aaPredicted RBP15.44■□□□□ 0.06
USF1-211ENST00000534633 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 TRIM75PA6NK02 468 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 UQCRFS1P1P0C7P4 283 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 CCL5P13501 91 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 GJA8P48165 433 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 G3BP1Q13283 466 aaKnown RBP eCLIP15.43■□□□□ 0.06
USF1-211ENST00000534633 PI16Q6UXB8 463 aa15.43■□□□□ 0.06
USF1-211ENST00000534633 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms