RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 ZFPM1Q8IX07 1006 aa22.51■■□□□ 1.19
VPS51-215ENST00000534557 SSH3Q8TE77 659 aa22.51■■□□□ 1.19
VPS51-215ENST00000534557 GNRH1P01148 92 aa22.5■■□□□ 1.19
VPS51-215ENST00000534557 POLA2Q14181 598 aa22.5■■□□□ 1.19
VPS51-215ENST00000534557 FASTKD5Q7L8L6 764 aaKnown RBP22.5■■□□□ 1.19
VPS51-215ENST00000534557 KCNH4Q9UQ05 1017 aa22.5■■□□□ 1.19
VPS51-215ENST00000534557 AK9Q5TCS8 1911 aa22.5■■□□□ 1.19
VPS51-215ENST00000534557 OTOFQ9HC10 1997 aa22.49■■□□□ 1.19
VPS51-215ENST00000534557 NPM3O75607 178 aaKnown RBP22.49■■□□□ 1.19
VPS51-215ENST00000534557 BAG3O95817 575 aa22.49■■□□□ 1.19
VPS51-215ENST00000534557 SCYL3Q8IZE3 742 aa22.49■■□□□ 1.19
VPS51-215ENST00000534557 NSUN4Q96CB9 384 aaKnown RBP22.49■■□□□ 1.19
VPS51-215ENST00000534557 ZHX2Q9Y6X8 837 aa22.49■■□□□ 1.19
VPS51-215ENST00000534557 ZBED9Q6R2W3 1325 aa22.49■■□□□ 1.19
VPS51-215ENST00000534557 PDHXO00330 501 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 ZBTB7BO15156 539 aaPredicted RBP22.48■■□□□ 1.19
VPS51-215ENST00000534557 CTNND1O60716 968 aaKnown RBP22.48■■□□□ 1.19
VPS51-215ENST00000534557 IGSF3O75054 1194 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 PLCG2P16885 1265 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 TNNI3KQ59H18 835 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 TMEM106CQ9BVX2 250 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 FPGT-TNNI3KV9GXZ4 949 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 LAMB1P07942 1786 aa22.48■■□□□ 1.19
VPS51-215ENST00000534557 HOXD10P28358 340 aa22.47■■□□□ 1.19
VPS51-215ENST00000534557 PRMT2P55345 433 aa22.47■■□□□ 1.19
VPS51-215ENST00000534557 MAP3K10Q02779 954 aa22.47■■□□□ 1.19
VPS51-215ENST00000534557 SLC9C1Q4G0N8 1177 aa22.47■■□□□ 1.19
VPS51-215ENST00000534557 PHF20L1A8MW92 1017 aa22.46■■□□□ 1.19
VPS51-215ENST00000534557 MCAMP43121 646 aa22.46■■□□□ 1.19
VPS51-215ENST00000534557 LACTBP83111 547 aaPredicted RBP22.46■■□□□ 1.19
VPS51-215ENST00000534557 NAA16Q6N069 864 aaPredicted RBP22.46■■□□□ 1.19
VPS51-215ENST00000534557 PI16Q6UXB8 463 aa22.46■■□□□ 1.19
VPS51-215ENST00000534557 PARK7Q99497 189 aaKnown RBP22.46■■□□□ 1.19
VPS51-215ENST00000534557 C1orf115Q9H7X2 142 aa22.46■■□□□ 1.19
VPS51-215ENST00000534557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.46■■□□□ 1.19
VPS51-215ENST00000534557 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.46■■□□□ 1.19
VPS51-215ENST00000534557 DDTLA6NHG4 134 aaPredicted RBP22.45■■□□□ 1.18
VPS51-215ENST00000534557 TBC1D12O60347 775 aa22.45■■□□□ 1.18
VPS51-215ENST00000534557 PTPRAP18433 802 aa22.45■■□□□ 1.18
VPS51-215ENST00000534557 ERC1Q8IUD2 1116 aa22.45■■□□□ 1.18
VPS51-215ENST00000534557 ARMC5Q96C12 935 aa22.45■■□□□ 1.18
VPS51-215ENST00000534557 DDX4Q9NQI0 724 aaKnown RBP22.45■■□□□ 1.18
VPS51-215ENST00000534557 NOP58Q9Y2X3 529 aaKnown RBP22.45■■□□□ 1.18
VPS51-215ENST00000534557 MYH2Q9UKX2 1941 aa22.45■■□□□ 1.18
VPS51-215ENST00000534557 RHBDL3P58872 404 aa22.44■■□□□ 1.18
VPS51-215ENST00000534557 C17orf99Q6UX52 265 aa22.44■■□□□ 1.18
VPS51-215ENST00000534557 SH3BP5LQ7L8J4 393 aa22.44■■□□□ 1.18
VPS51-215ENST00000534557 TEX11Q8IYF3 940 aa22.44■■□□□ 1.18
VPS51-215ENST00000534557 ZNF512BQ96KM6 892 aaPredicted RBP22.44■■□□□ 1.18
VPS51-215ENST00000534557 SNRKQ9NRH2 765 aa22.44■■□□□ 1.18
VPS51-215ENST00000534557 HSP90AB4PQ58FF6 505 aa22.43■■□□□ 1.18
VPS51-215ENST00000534557 DBNDD2Q9BQY9 259 aa22.43■■□□□ 1.18
VPS51-215ENST00000534557 CHMP4BQ9H444 224 aaKnown RBP22.43■■□□□ 1.18
VPS51-215ENST00000534557 CPA4Q9UI42 421 aa22.43■■□□□ 1.18
VPS51-215ENST00000534557 FMNL1O95466 1100 aaPredicted RBP22.42■■□□□ 1.18
VPS51-215ENST00000534557 RLBP1P12271 317 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 GADL1Q6ZQY3 521 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 TRIM34Q9BYJ4 488 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 TBC1D2Q9BYX2 928 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 OSBPL5Q9H0X9 879 aaPredicted RBP22.42■■□□□ 1.18
VPS51-215ENST00000534557 DHX36Q9H2U1 1008 aaKnown RBP22.42■■□□□ 1.18
VPS51-215ENST00000534557 AFG3L2Q9Y4W6 797 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 PTCH2Q9Y6C5 1203 aa22.42■■□□□ 1.18
VPS51-215ENST00000534557 A0A0G2JLL6 359 aaPredicted RBP22.41■■□□□ 1.18
VPS51-215ENST00000534557 PSMC4P43686 418 aa22.41■■□□□ 1.18
VPS51-215ENST00000534557 SLC4A8Q2Y0W8 1093 aa22.41■■□□□ 1.18
VPS51-215ENST00000534557 PRRT2Q7Z6L0 340 aaPredicted RBP22.41■■□□□ 1.18
VPS51-215ENST00000534557 PI4KBQ9UBF8 816 aa22.41■■□□□ 1.18
VPS51-215ENST00000534557 HERC5Q9UII4 1024 aaKnown RBP22.41■■□□□ 1.18
VPS51-215ENST00000534557 RFX7Q2KHR2 1363 aa22.4■■□□□ 1.18
VPS51-215ENST00000534557 ATRNL1Q5VV63 1379 aa22.4■■□□□ 1.18
VPS51-215ENST00000534557 PRPF38BQ5VTL8 546 aaKnown RBP22.4■■□□□ 1.18
VPS51-215ENST00000534557 CERS3Q8IU89 383 aa22.4■■□□□ 1.18
VPS51-215ENST00000534557 ZNF384Q8TF68 577 aa22.4■■□□□ 1.18
VPS51-215ENST00000534557 AATFQ9NY61 560 aaKnown RBP eCLIP22.4■■□□□ 1.18
VPS51-215ENST00000534557 SLC45A1Q9Y2W3 748 aa22.4■■□□□ 1.18
VPS51-215ENST00000534557 TRIM75PA6NK02 468 aa22.39■■□□□ 1.17
VPS51-215ENST00000534557 ZNF333Q96JL9 665 aa22.39■■□□□ 1.17
VPS51-215ENST00000534557 CCDC8Q9H0W5 538 aaPredicted RBP22.39■■□□□ 1.17
VPS51-215ENST00000534557 HMMRO75330 724 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 CYP2E1P05181 493 aaPredicted RBP22.38■■□□□ 1.17
VPS51-215ENST00000534557 FCGRTP55899 365 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 PPP4CP60510 307 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 CEP85Q6P2H3 762 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 RAET1EQ8TD07 263 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 PANK1Q8TE04 598 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 SH3RF3Q8TEJ3 882 aaPredicted RBP22.38■■□□□ 1.17
VPS51-215ENST00000534557 SMCR8Q8TEV9 937 aaPredicted RBP22.38■■□□□ 1.17
VPS51-215ENST00000534557 PNMA3Q9UL41 463 aa22.38■■□□□ 1.17
VPS51-215ENST00000534557 POTEFA5A3E0 1075 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 ZAP70P43403 619 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 PABPC4Q13310 644 aaKnown RBP eCLIP22.37■■□□□ 1.17
VPS51-215ENST00000534557 MOGSQ13724 837 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 GPAT2Q6NUI2 795 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 TMED8Q6PL24 325 aaPredicted RBP22.37■■□□□ 1.17
VPS51-215ENST00000534557 FOXP4Q8IVH2 680 aaPredicted RBP22.37■■□□□ 1.17
VPS51-215ENST00000534557 ARHGAP39Q9C0H5 1083 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 AS3MTQ9HBK9 375 aa22.37■■□□□ 1.17
VPS51-215ENST00000534557 SRRDQ9UH36 339 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms