RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 DDTLA6NHG4 134 aaPredicted RBP10.96□□□□□ -0.65
COPB1-211ENST00000534234 TLR2O60603 784 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 MCAMP43121 646 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 GSTO1P78417 241 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 CAP1Q01518 475 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 MAP3K10Q02779 954 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 PICALMQ13492 652 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 TNNI3KQ59H18 835 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 CCDC158Q5M9N0 1113 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 NOL9Q5SY16 702 aaKnown RBP10.96□□□□□ -0.65
COPB1-211ENST00000534234 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 ZNF384Q8TF68 577 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 NSUN4Q96CB9 384 aaKnown RBP10.96□□□□□ -0.65
COPB1-211ENST00000534234 ZCCHC17Q9NP64 241 aaKnown RBP10.96□□□□□ -0.65
COPB1-211ENST00000534234 DDX4Q9NQI0 724 aaKnown RBP10.96□□□□□ -0.65
COPB1-211ENST00000534234 LRP2BPQ9P2M1 347 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 KCNH4Q9UQ05 1017 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 FPGT-TNNI3KV9GXZ4 949 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.65
COPB1-211ENST00000534234 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 RHBDL3P58872 404 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 TTC39AQ5SRH9 613 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 DBNDD2Q9BQY9 259 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 SNRKQ9NRH2 765 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
COPB1-211ENST00000534234 ZHX2Q9Y6X8 837 aa10.95□□□□□ -0.66
COPB1-211ENST00000534234 MAP4K4O95819 1239 aaPredicted RBP10.94□□□□□ -0.66
COPB1-211ENST00000534234 SLURP2P0DP57 97 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 ANKRD23Q86SG2 305 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 PANK1Q8TE04 598 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 PICK1Q9NRD5 415 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 ATRNL1Q5VV63 1379 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 PDHXO00330 501 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 CXCL11O14625 94 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 CTNND1O60716 968 aaKnown RBP10.94□□□□□ -0.66
COPB1-211ENST00000534234 PTPRAP18433 802 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 KIF22Q14807 665 aa10.94□□□□□ -0.66
COPB1-211ENST00000534234 RFX7Q2KHR2 1363 aa10.93□□□□□ -0.66
COPB1-211ENST00000534234 LACTBP83111 547 aaPredicted RBP10.93□□□□□ -0.66
COPB1-211ENST00000534234 MOGSQ13724 837 aa10.93□□□□□ -0.66
COPB1-211ENST00000534234 NAA16Q6N069 864 aaPredicted RBP10.93□□□□□ -0.66
COPB1-211ENST00000534234 C17orf99Q6UX52 265 aa10.93□□□□□ -0.66
COPB1-211ENST00000534234 NOL10Q9BSC4 688 aaKnown RBP10.93□□□□□ -0.66
COPB1-211ENST00000534234 CCDC8Q9H0W5 538 aaPredicted RBP10.93□□□□□ -0.66
COPB1-211ENST00000534234 TBC1D12O60347 775 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 BAG3O95817 575 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 CYP2E1P05181 493 aaPredicted RBP10.92□□□□□ -0.66
COPB1-211ENST00000534234 MS4A1P11836 297 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 CEP85Q6P2H3 762 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 TEX11Q8IYF3 940 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 EAF2Q96CJ1 260 aaPredicted RBP10.92□□□□□ -0.66
COPB1-211ENST00000534234 ZNF512BQ96KM6 892 aaPredicted RBP10.92□□□□□ -0.66
COPB1-211ENST00000534234 ARHGAP39Q9C0H5 1083 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.92□□□□□ -0.66
COPB1-211ENST00000534234 CPA4Q9UI42 421 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 DBNLQ9UJU6 430 aaKnown RBP10.92□□□□□ -0.66
COPB1-211ENST00000534234 AFG3L2Q9Y4W6 797 aa10.92□□□□□ -0.66
COPB1-211ENST00000534234 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
COPB1-211ENST00000534234 ZAP70P43403 619 aa10.91□□□□□ -0.66
COPB1-211ENST00000534234 GPAT2Q6NUI2 795 aa10.91□□□□□ -0.66
COPB1-211ENST00000534234 FASTKD5Q7L8L6 764 aaKnown RBP10.91□□□□□ -0.66
COPB1-211ENST00000534234 NBPF11Q86T75 865 aa10.91□□□□□ -0.66
COPB1-211ENST00000534234 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
COPB1-211ENST00000534234 OSBPL5Q9H0X9 879 aaPredicted RBP10.91□□□□□ -0.66
COPB1-211ENST00000534234 AATFQ9NY61 560 aaKnown RBP eCLIP10.91□□□□□ -0.66
COPB1-211ENST00000534234 PTCH2Q9Y6C5 1203 aa10.91□□□□□ -0.66
COPB1-211ENST00000534234 OTOFQ9HC10 1997 aa10.91□□□□□ -0.66
COPB1-211ENST00000534234 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
COPB1-211ENST00000534234 POTEFA5A3E0 1075 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 FAM196BA6NMK8 535 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 GNRH1P01148 92 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 CYP2C8P10632 490 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 PLCG2P16885 1265 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 PSMC4P43686 418 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 PPP4CP60510 307 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 SLC9C1Q4G0N8 1177 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
COPB1-211ENST00000534234 PARK7Q99497 189 aaKnown RBP10.9□□□□□ -0.66
COPB1-211ENST00000534234 TMEM106CQ9BVX2 250 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 TLR7Q9NYK1 1049 aaKnown RBP10.9□□□□□ -0.66
COPB1-211ENST00000534234 EXOC6BQ9Y2D4 811 aa10.9□□□□□ -0.66
COPB1-211ENST00000534234 TRIM75PA6NK02 468 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 IGSF3O75054 1194 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 GADL1Q6ZQY3 521 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 ADGRA1Q86SQ6 560 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 CCDC84Q86UT8 332 aaPredicted RBP10.9□□□□□ -0.67
COPB1-211ENST00000534234 ERC1Q8IUD2 1116 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 TGFBRAP1Q8WUH2 860 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 ZNF333Q96JL9 665 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 DHX36Q9H2U1 1008 aaKnown RBP10.9□□□□□ -0.67
COPB1-211ENST00000534234 PIH1D3Q9NQM4 214 aaKnown RBP10.9□□□□□ -0.67
COPB1-211ENST00000534234 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.9□□□□□ -0.67
COPB1-211ENST00000534234 PI4KBQ9UBF8 816 aa10.9□□□□□ -0.67
COPB1-211ENST00000534234 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
COPB1-211ENST00000534234 HOXD10P28358 340 aa10.89□□□□□ -0.67
COPB1-211ENST00000534234 CTGFP29279 349 aa10.89□□□□□ -0.67
COPB1-211ENST00000534234 CAP2P40123 477 aa10.89□□□□□ -0.67
COPB1-211ENST00000534234 PRMT2P55345 433 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms