RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 BECN1Q14457 450 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 MCMDC2Q4G0Z9 681 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 DACT2Q5SW24 774 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 GJA3Q9Y6H8 435 aa13.11□□□□□ -0.31
CCDC90B-218ENST00000533761 TIAM2Q8IVF5 1701 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 SCN9AQ15858 1988 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 RPS12P25398 132 aaKnown RBP13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 ZAP70P43403 619 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 ANAPC15P60006 121 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 SCARF1Q14162 830 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 AGBL3Q8NEM8 1001 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 USP26Q9BXU7 913 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 JAG2Q9Y219 1238 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 SUGT1Q9Y2Z0 365 aa13.1□□□□□ -0.31
CCDC90B-218ENST00000533761 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 SALL1Q9NSC2 1324 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 MYH13Q9UKX3 1938 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 RNF20Q5VTR2 975 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 PI16Q6UXB8 463 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 OGFOD1Q8N543 542 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 ABCF2Q9UG63 623 aa13.09□□□□□ -0.31
CCDC90B-218ENST00000533761 IDH1O75874 414 aaKnown RBP13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 DDNO94850 711 aaPredicted RBP13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 MMP14P50281 582 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 UBE3CQ15386 1083 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 DPF2Q92785 391 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 LRP2BPQ9P2M1 347 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 PSME4Q14997 1843 aa13.08□□□□□ -0.32
CCDC90B-218ENST00000533761 CYP2E1P05181 493 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 ZKSCAN1P17029 563 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 SLC9C2Q5TAH2 1124 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 APPBP2Q92624 585 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 EDC3Q96F86 508 aaKnown RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 NDUFB9Q9Y6M9 179 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 COL1A1P02452 1464 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 RABEP1Q15276 862 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 KIAA0825Q8IV33 1275 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 GMLQ99445 158 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 MXD3Q9BW11 206 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 HDAC9Q9UKV0 1011 aa13.07□□□□□ -0.32
CCDC90B-218ENST00000533761 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 PPP1R3GB7ZBB8 358 aa13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 LMOD1P29536 600 aaPredicted RBP13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 IPO9Q96P70 1041 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 ANTXR1Q9H6X2 564 aa13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 MAST3O60307 1309 aa13.06□□□□□ -0.32
CCDC90B-218ENST00000533761 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 H7C1D1 291 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 PRDX5P30044 214 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 ADD2P35612 726 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 DZIP1Q86YF9 867 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 SLF2Q8IX21 1173 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 CNOT7Q9UIV1 285 aaKnown RBP13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 MYH7P12883 1935 aa13.05□□□□□ -0.32
CCDC90B-218ENST00000533761 PDE6AP16499 860 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 GNAT2P19087 354 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 HSPA4P34932 840 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 SCNN1DP51172 638 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 CERS3Q8IU89 383 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 AIDAQ96BJ3 306 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 DSCC1Q9BVC3 393 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 LSG1Q9H089 658 aaKnown RBP13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
CCDC90B-218ENST00000533761 ZNF280AP59817 542 aaPredicted RBP13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 GSTO1P78417 241 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 MECOMQ03112 1051 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 KRT32Q14532 448 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 MAP4K1Q92918 833 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 TEKT1Q969V4 418 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 PIH1D3Q9NQM4 214 aaKnown RBP13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 HACL1Q9UJ83 578 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 SERPINA10Q9UK55 444 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 LDHCP07864 332 aa13.03□□□□□ -0.32
CCDC90B-218ENST00000533761 VEGFAP15692 232 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms