RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 PSMC4P43686 418 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 TCP10Q12799 353 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 NFIAQ12857 509 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 PANK1Q8TE04 598 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 ADGRA2Q96PE1 1338 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 PTPRFP10586 1907 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 LAMA3Q16787 3333 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 H0YGN5 161 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 OSBPP22059 807 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 PRDX5P30044 214 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 MOGSQ13724 837 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 MTFR1Q15390 333 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 NOL9Q5SY16 702 aaKnown RBP10.78□□□□□ -0.68
COPB1-210ENST00000533533 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 RAET1EQ8TD07 263 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
COPB1-210ENST00000533533 DOCK2Q92608 1830 aa10.77□□□□□ -0.68
COPB1-210ENST00000533533 CXCL11O14625 94 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 FMNL1O95466 1100 aaPredicted RBP10.77□□□□□ -0.69
COPB1-210ENST00000533533 GNAI2P04899 355 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 LDHBP07195 334 aaKnown RBP10.77□□□□□ -0.69
COPB1-210ENST00000533533 RLBP1P12271 317 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 GRK4P32298 578 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 PARK7Q99497 189 aaKnown RBP10.77□□□□□ -0.69
COPB1-210ENST00000533533 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 GNL3LQ9NVN8 582 aaKnown RBP10.77□□□□□ -0.69
COPB1-210ENST00000533533 FAM198AQ9UFP1 575 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 FBXO3Q9UK99 471 aa10.77□□□□□ -0.69
COPB1-210ENST00000533533 PHF20L1A8MW92 1017 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 CIAO1O76071 339 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 BCRP11274 1271 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 GPAT2Q6NUI2 795 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 ZFPM1Q8IX07 1006 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 SIL1Q9H173 461 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 C1orf115Q9H7X2 142 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 CEP126Q9P2H0 1117 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 COG6Q9Y2V7 657 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 MYPNQ86TC9 1320 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 SALL1Q9NSC2 1324 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 ATRNL1Q5VV63 1379 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 A0A0C4DFX4 3053 aa10.76□□□□□ -0.69
COPB1-210ENST00000533533 PHIPQ8WWQ0 1821 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 SEMA3EO15041 775 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 SRGAP3O43295 1099 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 GJB1P08034 283 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 CYP2C8P10632 490 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 CCL5P13501 91 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 GJA8P48165 433 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 PRKCZQ05513 592 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 DPF3Q92784 378 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 IDI2Q9BXS1 227 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 BIN2Q9UBW5 565 aaPredicted RBP10.75□□□□□ -0.69
COPB1-210ENST00000533533 DENND2AQ9ULE3 1009 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 ZHX2Q9Y6X8 837 aa10.75□□□□□ -0.69
COPB1-210ENST00000533533 A0A0G2JLL6 359 aaPredicted RBP10.74□□□□□ -0.69
COPB1-210ENST00000533533 ENTPD3O75355 529 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 PHKA1P46020 1223 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 RGS3P49796 1198 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 FCGRTP55899 365 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 UBXN2AP68543 259 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 FASTKD5Q7L8L6 764 aaKnown RBP10.74□□□□□ -0.69
COPB1-210ENST00000533533 PRRT2Q7Z6L0 340 aaPredicted RBP10.74□□□□□ -0.69
COPB1-210ENST00000533533 UBE2Q1Q7Z7E8 422 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 SCYL3Q8IZE3 742 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 ZGPATQ8N5A5 531 aaKnown RBP10.74□□□□□ -0.69
COPB1-210ENST00000533533 PICK1Q9NRD5 415 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 PA2G4Q9UQ80 394 aaKnown RBP10.74□□□□□ -0.69
COPB1-210ENST00000533533 DOCK1Q14185 1865 aa10.74□□□□□ -0.69
COPB1-210ENST00000533533 PTPRAP18433 802 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 IL15P40933 162 aaPredicted RBP10.73□□□□□ -0.69
COPB1-210ENST00000533533 MAP3K10Q02779 954 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 MVPQ14764 893 aaKnown RBP10.73□□□□□ -0.69
COPB1-210ENST00000533533 C20orf194Q5TEA3 1177 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 CCDC102BQ68D86 513 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 SH3BP5LQ7L8J4 393 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 U2AF1L4Q8WU68 220 aaKnown RBP10.73□□□□□ -0.69
COPB1-210ENST00000533533 HTATIP2Q9BUP3 242 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 SLC45A1Q9Y2W3 748 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 GAKO14976 1311 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 RFX7Q2KHR2 1363 aa10.73□□□□□ -0.69
COPB1-210ENST00000533533 DDTLA6NHG4 134 aaPredicted RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 ZBTB7BO15156 539 aaPredicted RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 CTNND1O60716 968 aaKnown RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 ADORA1P30542 326 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 GADL1Q6ZQY3 521 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 ZSCAN29Q8IWY8 852 aaPredicted RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 SLF2Q8IX21 1173 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 FAM163AQ96GL9 167 aaPredicted RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 UNC93B1Q9H1C4 597 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 COPRSQ9NQ92 184 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 RBM27Q9P2N5 1060 aaKnown RBP10.72□□□□□ -0.69
COPB1-210ENST00000533533 DDX19BQ9UMR2 479 aa10.72□□□□□ -0.69
COPB1-210ENST00000533533 GABRQQ9UN88 632 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms