RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 RAET1EQ8TD07 263 aa19.54■□□□□ 0.72
CHMP4A-207ENST00000533523 PARK7Q99497 189 aaKnown RBP19.54■□□□□ 0.72
CHMP4A-207ENST00000533523 SRRDQ9UH36 339 aa19.54■□□□□ 0.72
CHMP4A-207ENST00000533523 MYPNQ86TC9 1320 aa19.53■□□□□ 0.72
CHMP4A-207ENST00000533523 OSBPP22059 807 aa19.53■□□□□ 0.72
CHMP4A-207ENST00000533523 LRCH3Q96II8 777 aa19.53■□□□□ 0.72
CHMP4A-207ENST00000533523 DENND2AQ9ULE3 1009 aa19.53■□□□□ 0.72
CHMP4A-207ENST00000533523 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 HOXD10P28358 340 aa19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 DZIP1Q86YF9 867 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 FBXO3Q9UK99 471 aa19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 PA2G4Q9UQ80 394 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 LRRFIP2Q9Y608 721 aaKnown RBP19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 ATRNL1Q5VV63 1379 aa19.52■□□□□ 0.72
CHMP4A-207ENST00000533523 CDH23Q9H251 3354 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 SEMA3EO15041 775 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 ADORA1P30542 326 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 GRK4P32298 578 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 RGS3P49796 1198 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 MOGSQ13724 837 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 ZSCAN29Q8IWY8 852 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 ZFPM1Q8IX07 1006 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 PICK1Q9NRD5 415 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 BIN2Q9UBW5 565 aaPredicted RBP19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 RFX7Q2KHR2 1363 aa19.51■□□□□ 0.71
CHMP4A-207ENST00000533523 CYP2C8P10632 490 aa19.5■□□□□ 0.71
CHMP4A-207ENST00000533523 IL15P40933 162 aaPredicted RBP19.5■□□□□ 0.71
CHMP4A-207ENST00000533523 ZGPATQ8N5A5 531 aaKnown RBP19.5■□□□□ 0.71
CHMP4A-207ENST00000533523 SLC17A8Q8NDX2 589 aa19.5■□□□□ 0.71
CHMP4A-207ENST00000533523 ZBTB7BO15156 539 aaPredicted RBP19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 FCGRTP55899 365 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 PRKCZQ05513 592 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 GADL1Q6ZQY3 521 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 SCYL3Q8IZE3 742 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 MUC3AQ02505 3323 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 GAKO14976 1311 aa19.49■□□□□ 0.71
CHMP4A-207ENST00000533523 LOC285556D6RIA3 1793 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 CXCL11O14625 94 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 PICALMQ13492 652 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 RASGRF1Q13972 1273 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 CCDC102BQ68D86 513 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 GPAT2Q6NUI2 795 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 DPF3Q92784 378 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 API5Q9BZZ5 524 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 NOB1Q9ULX3 412 aaKnown RBP19.48■□□□□ 0.71
CHMP4A-207ENST00000533523 A0A0G2JLL6 359 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 ENTPD3O75355 529 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 BCRP11274 1271 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 CCL5P13501 91 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 GJA8P48165 433 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 RARSP54136 660 aaKnown RBP19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 PRRT2Q7Z6L0 340 aaPredicted RBP19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 NKX2-3Q8TAU0 364 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 IDI2Q9BXS1 227 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 ZHX2Q9Y6X8 837 aa19.47■□□□□ 0.71
CHMP4A-207ENST00000533523 PTPRAP18433 802 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 BTDP43251 543 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 UBXN2AP68543 259 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 SH3BP5LQ7L8J4 393 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 FASTKD5Q7L8L6 764 aaKnown RBP19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 SLF2Q8IX21 1173 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 MEIS3Q99687 375 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 RNF208Q9H0X6 261 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 DDX4Q9NQI0 724 aaKnown RBP19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 MAST2Q6P0Q8 1798 aa19.46■□□□□ 0.71
CHMP4A-207ENST00000533523 SLAIN1Q8ND83 568 aa19.45■□□□□ 0.7
CHMP4A-207ENST00000533523 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.45■□□□□ 0.7
CHMP4A-207ENST00000533523 CDK5RAP2Q96SN8 1893 aa19.45■□□□□ 0.7
CHMP4A-207ENST00000533523 MROH7-TTC4A0A0A0MT08 1334 aa19.45■□□□□ 0.7
CHMP4A-207ENST00000533523 DDTLA6NHG4 134 aaPredicted RBP19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 TRIM75PA6NK02 468 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 SLURP2P0DP57 97 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 SMCR8Q8TEV9 937 aaPredicted RBP19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 UNC93B1Q9H1C4 597 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 COPRSQ9NQ92 184 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 GABRQQ9UN88 632 aa19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 PDS5AQ29RF7 1337 aaKnown RBP19.44■□□□□ 0.7
CHMP4A-207ENST00000533523 A0A1B0GUL7 405 aa19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 GJB1P08034 283 aa19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 TIMM10P62072 90 aa19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 SPTY2D1Q68D10 685 aaPredicted RBP19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 CCDC84Q86UT8 332 aaPredicted RBP19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 AFG3L2Q9Y4W6 797 aa19.43■□□□□ 0.7
CHMP4A-207ENST00000533523 MYO5AQ9Y4I1 1855 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 TFCP2Q12800 502 aa19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 MVPQ14764 893 aaKnown RBP19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 ERICH6Q7L0X2 663 aa19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 XAGE2Q96GT9 111 aa19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 HTATIP2Q9BUP3 242 aa19.42■□□□□ 0.7
CHMP4A-207ENST00000533523 SIPA1L1O43166 1804 aa19.41■□□□□ 0.7
CHMP4A-207ENST00000533523 FOCADQ5VW36 1801 aa19.41■□□□□ 0.7
CHMP4A-207ENST00000533523 TNPO2O14787 897 aaKnown RBP19.41■□□□□ 0.7
CHMP4A-207ENST00000533523 SRGAP3O43295 1099 aa19.41■□□□□ 0.7
CHMP4A-207ENST00000533523 ADCY3O60266 1144 aa19.41■□□□□ 0.7
CHMP4A-207ENST00000533523 CTNND1O60716 968 aaKnown RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms