RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 RASAL3Q86YV0 1011 aa13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 TEX11Q8IYF3 940 aa13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 MAGEB6Q8N7X4 407 aa13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 BOLA2Q9H3K6 86 aa13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 ANTXR1Q9H6X2 564 aa13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 AATFQ9NY61 560 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBASH3B-208ENST00000533451 THSD7BQ9C0I4 1608 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 GPR75-ASB3A0A0A6YYF3 556 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 SLC10A3P09131 477 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 MAP2K2P36507 400 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 AAMPQ13685 434 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 TSHZ3Q63HK5 1081 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 DCAF15Q66K64 600 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 MIGA2Q7L4E1 593 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 FAM151AQ8WW52 585 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 SLC10A4Q96EP9 437 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 TEPSINQ96N21 525 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 DCBLD2Q96PD2 775 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 CSADQ9Y600 493 aa13.93□□□□□ -0.18
UBASH3B-208ENST00000533451 PLCG2P16885 1265 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 KIF23Q02241 960 aaPredicted RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 ANKRD45Q5TZF3 282 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 SH3RF3Q8TEJ3 882 aaPredicted RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 EDC3Q96F86 508 aaKnown RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 FAM163AQ96GL9 167 aaPredicted RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 CLMNQ96JQ2 1002 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 CSRNP1Q96S65 589 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 ZIC5Q96T25 663 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 ELP3Q9H9T3 547 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 ECHDC1Q9NTX5 307 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 PAG1Q9NWQ8 432 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 FAM198AQ9UFP1 575 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 RPAP1Q9BWH6 1393 aaPredicted RBP13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 MYH7P12883 1935 aa13.92□□□□□ -0.18
UBASH3B-208ENST00000533451 FAM155AB1AL88 458 aaPredicted RBP13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 USP2O75604 605 aaPredicted RBP13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 ATP5JP18859 108 aa13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 ADGRA1Q86SQ6 560 aa13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 CDK5RAP2Q96SN8 1893 aa13.91□□□□□ -0.18
UBASH3B-208ENST00000533451 ENTPD3O75355 529 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 WDHD1O75717 1129 aaPredicted RBP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 LDLRAD1Q5T700 205 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 SLC9C2Q5TAH2 1124 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 B4GALNT3Q6L9W6 998 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 ZFPM1Q8IX07 1006 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 IDI2Q9BXS1 227 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 DDX4Q9NQI0 724 aaKnown RBP13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 TSKSQ9UJT2 592 aa13.9□□□□□ -0.18
UBASH3B-208ENST00000533451 FOXN1O15353 648 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 PDE6AP16499 860 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 RHBDL3P58872 404 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 SLC4A8Q2Y0W8 1093 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 OTUD7AQ8TE49 926 aaPredicted RBP13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 TGFBRAP1Q8WUH2 860 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 HAUS7Q99871 368 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 TRIM34Q9BYJ4 488 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 WBP1LQ9NX94 342 aa13.89□□□□□ -0.19
UBASH3B-208ENST00000533451 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 MAGEB6P1A0A0J9YX57 407 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 ERC2O15083 957 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 MAP4K4O95819 1239 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 MX1P20591 662 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 USP5P45974 858 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 VGLL4Q14135 290 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 WNK4Q96J92 1243 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 SAP30BPQ9UHR5 308 aaKnown RBP13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 MYH1P12882 1939 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 ZNF532Q9HCE3 1301 aa13.88□□□□□ -0.19
UBASH3B-208ENST00000533451 FOCADQ5VW36 1801 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 DDTLA6NHG4 134 aaPredicted RBP13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 SREBF2Q12772 1141 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 OPTNQ96CV9 577 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 LNPKQ9C0E8 428 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 NAV1Q8NEY1 1877 aa13.87□□□□□ -0.19
UBASH3B-208ENST00000533451 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 IGSF3O75054 1194 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 TRPA1O75762 1119 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 INPP5BP32019 993 aa13.86□□□□□ -0.19
UBASH3B-208ENST00000533451 LBX1P52954 281 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms