RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 POLR3DP05423 398 aaPredicted RBP8.77□□□□□ -1
CSRP1-218ENST00000533402 NBPF6Q5VWK0 638 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 NBPF5PQ86XG9 351 aaPredicted RBP8.77□□□□□ -1
CSRP1-218ENST00000533402 KCNG4Q8TDN1 519 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 TRIM47Q96LD4 638 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 NBPF4Q96M43 638 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 Q9H521 79 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 ARHGEF10O15013 1369 aa8.77□□□□□ -1
CSRP1-218ENST00000533402 AKR1B15C9JRZ8 316 aaPredicted RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 SPECC1L-ADORA2AF8WAN1 911 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 CA8P35219 290 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 ZNF530Q6P9A1 599 aaPredicted RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 SND1Q7KZF4 910 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 CDCA7Q9BWT1 371 aaPredicted RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 LMBR1Q8WVP7 490 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 PALMDQ9NP74 551 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 NPATQ14207 1427 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 LRRIQ1Q96JM4 1722 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 HMGB1P1B2RPK0 211 aaPredicted RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 GLRX3O76003 335 aaKnown RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 BABAM1Q9NWV8 329 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 NUCB1Q02818 461 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 CCDC26Q8TAB7 109 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 EPSTI1Q96J88 318 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 TTF2Q9UNY4 1162 aaKnown RBP8.77□□□□□ -1.01
CSRP1-218ENST00000533402 RTL1A6NKG5 1358 aa8.77□□□□□ -1.01
CSRP1-218ENST00000533402 EIF3CLB5ME19 914 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 ATICP31939 592 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 TAF11Q15544 211 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 GDAP1L1Q96MZ0 367 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 EIF3CQ99613 913 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 ATG3Q9NT62 314 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 EDC4Q6P2E9 1401 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 CFAP157Q5JU67 520 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 TCP11Q8WWU5 503 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 WDR70Q9NW82 654 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 LMTK2Q8IWU2 1503 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 HNRNPCP07910 306 aaKnown RBP eCLIP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 GUCY2CP25092 1073 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 SCINQ9Y6U3 715 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 IFIT1P09914 478 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 CCT2P78371 535 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 SLMAPQ14BN4 828 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 GGNBP2Q9H3C7 697 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 PLEKHA4Q9H4M7 779 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 PTPRKQ15262 1439 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 GNAT3A8MTJ3 354 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 PAK2Q13177 524 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 CROCCP2Q86T23 111 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 ARMCX6Q7L4S7 300 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 NEURL4Q96JN8 1562 aa8.76□□□□□ -1.01
CSRP1-218ENST00000533402 POLR3AO14802 1390 aaPredicted RBP8.76□□□□□ -1.01
CSRP1-218ENST00000533402 SMC1BQ8NDV3 1235 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 C19orf44Q9H6X5 657 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 RMND1Q9NWS8 449 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 CALCOCO2Q13137 446 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 PSMD6Q15008 389 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 GNPTABQ3T906 1256 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 NAA16Q6N069 864 aaPredicted RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 ZGPATQ8N5A5 531 aaKnown RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 JAKMIP2Q96AA8 810 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 SPAG5Q96R06 1193 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 CHMP2AO43633 222 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 RFC4P35249 363 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 STXBP4Q6ZWJ1 553 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 CENPKQ9BS16 269 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 ZFXP17010 805 aaPredicted RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 PPP1R21Q6ZMI0 780 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 ZNF513Q8N8E2 541 aaPredicted RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 KLHL14Q9P2G3 628 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 SETBP1Q9Y6X0 1596 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 ARHGAP6O43182 974 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 GSTO1P78417 241 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 TRPC3Q13507 836 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 PLCB1Q9NQ66 1216 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 LRP2BPQ9P2M1 347 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 PTPRCP08575 1304 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 PTPRTO14522 1441 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 RNF40O75150 1001 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 KIF24Q5T7B8 1368 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 TTC22Q5TAA0 569 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 CCDC144CPQ8IYA2 1237 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 RNF17Q9BXT8 1623 aaKnown RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 BAG2O95816 211 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 CAPRIN2Q6IMN6 1127 aaKnown RBP8.75□□□□□ -1.01
CSRP1-218ENST00000533402 SAMM50Q9Y512 469 aa8.75□□□□□ -1.01
CSRP1-218ENST00000533402 RRAGBQ5VZM2 374 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 GRAMD4Q6IC98 578 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 FBXO41Q8TF61 875 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 CEP126Q9P2H0 1117 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 ABCC3O15438 1527 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 PHEXP78562 749 aa8.74□□□□□ -1.01
CSRP1-218ENST00000533402 CDC5LQ99459 802 aaKnown RBP8.74□□□□□ -1.01
CSRP1-218ENST00000533402 SLC12A5Q9H2X9 1139 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms