RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SMC5Q8IY18 1101 aa24.85■■□□□ 1.57
CCS-208ENST00000533244 TEX11Q8IYF3 940 aa24.85■■□□□ 1.57
CCS-208ENST00000533244 PICALMQ13492 652 aa24.84■■□□□ 1.57
CCS-208ENST00000533244 GPATCH3Q96I76 525 aa24.84■■□□□ 1.57
CCS-208ENST00000533244 RWDD1Q9H446 243 aaPredicted RBP24.84■■□□□ 1.57
CCS-208ENST00000533244 AK9Q5TCS8 1911 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 TTC41PQ6P2S7 1318 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 DDTLA6NHG4 134 aaPredicted RBP24.83■■□□□ 1.57
CCS-208ENST00000533244 FOXN1O15353 648 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 PDE6AP16499 860 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 MAP3K9P80192 1104 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 SPRYD7Q5W111 196 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 SLC10A4Q96EP9 437 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 ZNF341Q9BYN7 854 aa24.83■■□□□ 1.57
CCS-208ENST00000533244 OSBPL5Q9H0X9 879 aaPredicted RBP24.83■■□□□ 1.57
CCS-208ENST00000533244 TCRBV5S4A2TA0A5A2 114 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 IGHDP01880 384 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 MAP3K10Q02779 954 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 VGLL4Q14135 290 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 SLC9C2Q5TAH2 1124 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 ANKRD45Q5TZF3 282 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 CERS3Q8IU89 383 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 REM2Q8IYK8 340 aaPredicted RBP24.82■■□□□ 1.56
CCS-208ENST00000533244 OTUD7AQ8TE49 926 aaPredicted RBP24.82■■□□□ 1.56
CCS-208ENST00000533244 CSRNP1Q96S65 589 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 ZNF112Q9UJU3 913 aa24.82■■□□□ 1.56
CCS-208ENST00000533244 ZBTB48P10074 688 aaPredicted RBP24.81■■□□□ 1.56
CCS-208ENST00000533244 DYNLL1P63167 89 aaKnown RBP24.81■■□□□ 1.56
CCS-208ENST00000533244 IRX6P78412 446 aaPredicted RBP24.81■■□□□ 1.56
CCS-208ENST00000533244 TSHZ3Q63HK5 1081 aa24.81■■□□□ 1.56
CCS-208ENST00000533244 MIGA2Q7L4E1 593 aa24.81■■□□□ 1.56
CCS-208ENST00000533244 AIDAQ96BJ3 306 aa24.81■■□□□ 1.56
CCS-208ENST00000533244 WNK4Q96J92 1243 aa24.81■■□□□ 1.56
CCS-208ENST00000533244 WRNIP1Q96S55 665 aa24.81■■□□□ 1.56
CCS-208ENST00000533244 MIGA1Q8NAN2 632 aa24.8■■□□□ 1.56
CCS-208ENST00000533244 PI4K2BQ8TCG2 481 aa24.8■■□□□ 1.56
CCS-208ENST00000533244 RIOK1Q9BRS2 568 aaKnown RBP24.8■■□□□ 1.56
CCS-208ENST00000533244 MYH7P12883 1935 aa24.8■■□□□ 1.56
CCS-208ENST00000533244 ZNF532Q9HCE3 1301 aa24.8■■□□□ 1.56
CCS-208ENST00000533244 GJA5P36382 358 aa24.79■■□□□ 1.56
CCS-208ENST00000533244 ZSCAN29Q8IWY8 852 aaPredicted RBP24.79■■□□□ 1.56
CCS-208ENST00000533244 SNCAIPQ9Y6H5 919 aa24.79■■□□□ 1.56
CCS-208ENST00000533244 FLT1P17948 1338 aa24.79■■□□□ 1.56
CCS-208ENST00000533244 CA12O43570 354 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 ADD2P35612 726 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 TGFBRAP1Q8WUH2 860 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 ELP3Q9H9T3 547 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 CSADQ9Y600 493 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 SIPA1L1O43166 1804 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 MX1P20591 662 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 BEGAINQ9BUH8 593 aa24.78■■□□□ 1.56
CCS-208ENST00000533244 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.78■■□□□ 1.561e-7■■■■□ 25.3
CCS-208ENST00000533244 PHF20L1A8MW92 1017 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 ERC2O15083 957 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 TBC1D12O60347 775 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 INPP5BP32019 993 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 TM4SF4P48230 202 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 CTCFP49711 727 aaPredicted RBP24.77■■□□□ 1.56
CCS-208ENST00000533244 MKRN3Q13064 507 aaKnown RBP24.77■■□□□ 1.56
CCS-208ENST00000533244 MAPKAPK5Q8IW41 473 aa24.77■■□□□ 1.56
CCS-208ENST00000533244 ZKSCAN4Q969J2 545 aaPredicted RBP24.77■■□□□ 1.56
CCS-208ENST00000533244 ZBTB47Q9UFB7 747 aaPredicted RBP24.77■■□□□ 1.56
CCS-208ENST00000533244 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 GLRX3O76003 335 aaKnown RBP24.76■■□□□ 1.55
CCS-208ENST00000533244 HSPA8P11142 646 aaKnown RBP24.76■■□□□ 1.55
CCS-208ENST00000533244 UBE3CQ15386 1083 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 NOL9Q5SY16 702 aaKnown RBP24.76■■□□□ 1.55
CCS-208ENST00000533244 KBTBD3Q8NAB2 608 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 OPTNQ96CV9 577 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 DHX36Q9H2U1 1008 aaKnown RBP24.76■■□□□ 1.55
CCS-208ENST00000533244 SAGE1Q9NXZ1 904 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 STAP2Q9UGK3 403 aa24.76■■□□□ 1.55
CCS-208ENST00000533244 DDX60LQ5H9U9 1706 aaKnown RBP24.75■■□□□ 1.55
CCS-208ENST00000533244 MAGEB6P1A0A0J9YX57 407 aa24.75■■□□□ 1.55
CCS-208ENST00000533244 CNKSR2Q8WXI2 1034 aa24.75■■□□□ 1.55
CCS-208ENST00000533244 MANSC4A6NHS7 340 aaPredicted RBP24.74■■□□□ 1.55
CCS-208ENST00000533244 SLURP2P0DP57 97 aa24.74■■□□□ 1.55
CCS-208ENST00000533244 SREBF2Q12772 1141 aa24.74■■□□□ 1.55
CCS-208ENST00000533244 SLFNL1Q499Z3 407 aa24.74■■□□□ 1.55
CCS-208ENST00000533244 CHGBP05060 677 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 NUCB1Q02818 461 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 ZSCAN25Q6NSZ9 544 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 METTL16Q86W50 562 aaKnown RBP24.73■■□□□ 1.55
CCS-208ENST00000533244 ERO1BQ86YB8 467 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 LNPKQ9C0E8 428 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 RNF186Q9NXI6 227 aa24.73■■□□□ 1.55
CCS-208ENST00000533244 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.73■■□□□ 1.55
CCS-208ENST00000533244 PDE1AP54750 535 aa24.72■■□□□ 1.55
CCS-208ENST00000533244 INHBEP58166 350 aa24.72■■□□□ 1.55
CCS-208ENST00000533244 PI4KBQ9UBF8 816 aa24.72■■□□□ 1.55
CCS-208ENST00000533244 MYH1P12882 1939 aa24.72■■□□□ 1.55
CCS-208ENST00000533244 TESPA1A2RU30 521 aaPredicted RBP24.71■■□□□ 1.55
CCS-208ENST00000533244 CHD1LQ86WJ1 897 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 LCORLQ8N3X6 602 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 OTUD5Q96G74 571 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 MS4A4AQ96JQ5 239 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 PRDM10Q9NQV6 1147 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 HERC5Q9UII4 1024 aaKnown RBP24.71■■□□□ 1.55
CCS-208ENST00000533244 DOCK1Q14185 1865 aa24.71■■□□□ 1.55
CCS-208ENST00000533244 USP5P45974 858 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms