RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 PLEKHH1Q9ULM0 1364 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 TSPY2A6NKD2 308 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 TRIM66O15016 1216 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 HIP1RO75146 1068 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 BAG3O95817 575 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 PSMD7P51665 324 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 INTS8Q75QN2 995 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 FBXO18Q8NFZ0 1043 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 KAT14Q9H8E8 782 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 ZRANB1Q9UGI0 708 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 ARIH1Q9Y4X5 557 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 SBNO1A3KN83 1393 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 PABPN1LA6NDY0 278 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 ERCC6LQ2NKX8 1250 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 CAPRIN2Q6IMN6 1127 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 PHAXQ9H814 394 aaKnown RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 POLR3AO14802 1390 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 NPC1L1Q9UHC9 1359 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 HGSO14964 777 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 GFAPP14136 432 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 ABCD1P33897 745 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 CNNM3Q8NE01 707 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 CXorf38Q8TB03 319 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 NUP88Q99567 741 aaPredicted RBP7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 MMRN2Q9H8L6 949 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 POLKQ9UBT6 870 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 CDC42BPAQ5VT25 1732 aa7.81□□□□□ -1.16
TGFBR3-210ENST00000533089 DIP2CQ9Y2E4 1556 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 A6NNZ2 444 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 LDHCP07864 332 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ELF1P32519 619 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 UBE2HP62256 183 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 RAB3GAP1Q15042 981 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 KARSQ15046 597 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 TUBB8Q3ZCM7 444 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 TDRD12Q587J7 1177 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 SMARCC2Q8TAQ2 1214 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 SMC6Q96SB8 1091 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 PCDH11XQ9BZA7 1347 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 PCDH11YQ9BZA8 1340 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF335Q9H4Z2 1342 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 HOXC9P31274 260 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CCT2P78371 535 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 AKAP4Q5JQC9 854 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 LDHAL6AQ6ZMR3 332 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CAPZA3Q96KX2 299 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 SNRKQ9NRH2 765 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CNGA1P29973 690 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 TUBB4BP68371 445 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 JARID2Q92833 1246 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ZBTB10Q96DT7 871 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 MAP3K2Q9Y2U5 619 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 RAD50Q92878 1312 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CHUKO15111 745 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 FGFR1OPO95684 399 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 FBLN1P23142 703 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CCDC155Q8N6L0 562 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ARHGEF2Q92974 986 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 CALML4Q96GE6 196 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 DDX19AQ9NUU7 478 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF215Q9UL58 517 aaPredicted RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 PDE4BQ07343 736 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 EIF4A2Q14240 407 aaKnown RBP7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 GRIPAP1Q4V328 841 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 ETAA1Q9NY74 926 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
TGFBR3-210ENST00000533089 PRC1O43663 620 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 SYT1P21579 422 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 PLS1Q14651 629 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 C8orf34Q49A92 452 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 CCDC184Q52MB2 194 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 PRR16Q569H4 304 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 APBB1IPQ7Z5R6 666 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 DDX23Q9BUQ8 820 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 IL16Q14005 1332 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 MAP3K19Q56UN5 1328 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 CIB2O75838 187 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 ZBTB16Q05516 673 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 TAF11Q15544 211 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 CFAP58Q5T655 872 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 DTNBP1Q96EV8 351 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 A0A1W2PRG0 241 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 CSPG5O95196 566 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 IDEP14735 1019 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 PICALMQ13492 652 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 PHLDB2Q86SQ0 1253 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 GCFC2P16383 781 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 CETN1Q12798 172 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 SLC30A9Q6PML9 568 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 DDX17Q92841 729 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 DRC3Q9H069 523 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 IQGAP3Q86VI3 1631 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 BICDL2A1A5D9 508 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 SPECC1L-ADORA2AF8WAN1 911 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms