RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 EVI5LQ96CN4 794 aa29.99■■■□□ 2.39
USP48-214ENST00000532737 SSC5DA1L4H1 1573 aa29.98■■■□□ 2.39
USP48-214ENST00000532737 MAGEB6P1A0A0J9YX57 407 aa29.98■■■□□ 2.39
USP48-214ENST00000532737 RNF113AO15541 343 aaKnown RBP29.98■■■□□ 2.39
USP48-214ENST00000532737 MOB2Q70IA6 237 aa29.98■■■□□ 2.39
USP48-214ENST00000532737 C2orf69Q8N8R5 385 aa29.98■■■□□ 2.39
USP48-214ENST00000532737 FSD1Q9BTV5 496 aa29.98■■■□□ 2.39
USP48-214ENST00000532737 NPM3O75607 178 aaKnown RBP29.97■■■□□ 2.39
USP48-214ENST00000532737 FZD1Q9UP38 647 aa29.97■■■□□ 2.39
USP48-214ENST00000532737 TLL2Q9Y6L7 1015 aa29.97■■■□□ 2.39
USP48-214ENST00000532737 PRKG1Q13976 671 aa29.96■■■□□ 2.39
USP48-214ENST00000532737 SH3BP5LQ7L8J4 393 aa29.96■■■□□ 2.39
USP48-214ENST00000532737 SAPCD2Q86UD0 394 aa29.96■■■□□ 2.39
USP48-214ENST00000532737 RPAP1Q9BWH6 1393 aaPredicted RBP29.95■■■□□ 2.39
USP48-214ENST00000532737 SKAP1Q86WV1 359 aa29.95■■■□□ 2.39
USP48-214ENST00000532737 CERS3Q8IU89 383 aa29.95■■■□□ 2.39
USP48-214ENST00000532737 LCORLQ8N3X6 602 aa29.95■■■□□ 2.39
USP48-214ENST00000532737 TGFBRAP1Q8WUH2 860 aa29.95■■■□□ 2.39
USP48-214ENST00000532737 TRIM6-TRIM34B2RNG4 842 aa29.94■■■□□ 2.38
USP48-214ENST00000532737 ZFYP08048 801 aaPredicted RBP29.94■■■□□ 2.38
USP48-214ENST00000532737 FKBP1BP68106 108 aa29.94■■■□□ 2.38
USP48-214ENST00000532737 TTLL12Q14166 644 aaPredicted RBP29.94■■■□□ 2.38
USP48-214ENST00000532737 MAPKAPK5Q8IW41 473 aa29.94■■■□□ 2.38
USP48-214ENST00000532737 PUS7LQ9H0K6 701 aaKnown RBP29.94■■■□□ 2.38
USP48-214ENST00000532737 ARMT1Q9H993 441 aa29.94■■■□□ 2.38
USP48-214ENST00000532737 UBE2Q2LH0YL09 131 aa29.93■■■□□ 2.38
USP48-214ENST00000532737 MBD4O95243 580 aa29.93■■■□□ 2.38
USP48-214ENST00000532737 LBX1P52954 281 aa29.93■■■□□ 2.38
USP48-214ENST00000532737 LRRFIP1Q32MZ4 808 aaKnown RBP29.93■■■□□ 2.38
USP48-214ENST00000532737 APPBP2Q92624 585 aa29.93■■■□□ 2.38
USP48-214ENST00000532737 RILPL2Q969X0 211 aa29.93■■■□□ 2.38
USP48-214ENST00000532737 OSBPL5Q9H0X9 879 aaPredicted RBP29.93■■■□□ 2.38
USP48-214ENST00000532737 DDTLA6NHG4 134 aaPredicted RBP29.92■■■□□ 2.38
USP48-214ENST00000532737 HUNKP57058 714 aa29.92■■■□□ 2.38
USP48-214ENST00000532737 ZSCAN29Q8IWY8 852 aaPredicted RBP29.92■■■□□ 2.38
USP48-214ENST00000532737 OSBP2Q969R2 916 aa29.92■■■□□ 2.38
USP48-214ENST00000532737 CAPNS2Q96L46 248 aa29.92■■■□□ 2.38
USP48-214ENST00000532737 FLT1P17948 1338 aa29.92■■■□□ 2.38
USP48-214ENST00000532737 PPP1R12BO60237 982 aaPredicted RBP29.91■■■□□ 2.38
USP48-214ENST00000532737 USP2O75604 605 aaPredicted RBP29.91■■■□□ 2.38
USP48-214ENST00000532737 HSPA8P11142 646 aaKnown RBP29.91■■■□□ 2.38
USP48-214ENST00000532737 MAP2K1Q02750 393 aaPredicted RBP29.91■■■□□ 2.38
USP48-214ENST00000532737 TTC22Q5TAA0 569 aa29.91■■■□□ 2.38
USP48-214ENST00000532737 ANGEL1Q9UNK9 670 aaKnown RBP29.91■■■□□ 2.38
USP48-214ENST00000532737 GSPT1P15170 499 aaKnown RBP29.9■■■□□ 2.38
USP48-214ENST00000532737 ARMC9Q7Z3E5 817 aa29.9■■■□□ 2.38
USP48-214ENST00000532737 CRNKL1Q9BZJ0 848 aaKnown RBP29.9■■■□□ 2.38
USP48-214ENST00000532737 MYH7P12883 1935 aa29.9■■■□□ 2.38
USP48-214ENST00000532737 USP5P45974 858 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 ZMYM1Q5SVZ6 1142 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 CYP4F22Q6NT55 531 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 MIGA2Q7L4E1 593 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 CSRNP1Q96S65 589 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 PAPPA2Q9BXP8 1791 aa29.89■■■□□ 2.38
USP48-214ENST00000532737 ATRNL1Q5VV63 1379 aa29.89■■■□□ 2.37
USP48-214ENST00000532737 PRKAB2O43741 272 aa29.88■■■□□ 2.37
USP48-214ENST00000532737 ECE1P42892 770 aa29.88■■■□□ 2.37
USP48-214ENST00000532737 MAP3K11Q16584 847 aa29.88■■■□□ 2.37
USP48-214ENST00000532737 LDLRAD1Q5T700 205 aa29.88■■■□□ 2.37
USP48-214ENST00000532737 HOOK2Q96ED9 719 aa29.88■■■□□ 2.37
USP48-214ENST00000532737 SEC62Q99442 399 aaKnown RBP29.88■■■□□ 2.37
USP48-214ENST00000532737 M0R2C6 588 aa29.87■■■□□ 2.37
USP48-214ENST00000532737 SDR42E1Q8WUS8 393 aa29.87■■■□□ 2.37
USP48-214ENST00000532737 STRBPQ96SI9 672 aaKnown RBP29.87■■■□□ 2.37
USP48-214ENST00000532737 SAP30BPQ9UHR5 308 aaKnown RBP29.87■■■□□ 2.37
USP48-214ENST00000532737 COL2A1P02458 1487 aaPredicted RBP29.87■■■□□ 2.37
USP48-214ENST00000532737 SLURP2P0DP57 97 aa29.86■■■□□ 2.37
USP48-214ENST00000532737 PAXIP1Q6ZW49 1069 aaPredicted RBP29.86■■■□□ 2.37
USP48-214ENST00000532737 TICAM2Q86XR7 235 aa29.86■■■□□ 2.37
USP48-214ENST00000532737 HHIPL1Q96JK4 782 aa29.86■■■□□ 2.37
USP48-214ENST00000532737 PALD1Q9ULE6 856 aa29.86■■■□□ 2.37
USP48-214ENST00000532737 DCAF15Q66K64 600 aa29.85■■■□□ 2.37
USP48-214ENST00000532737 GPAA1O43292 621 aa29.84■■■□□ 2.37
USP48-214ENST00000532737 SDSP20132 328 aa29.84■■■□□ 2.37
USP48-214ENST00000532737 IREB2P48200 963 aaKnown RBP29.84■■■□□ 2.37
USP48-214ENST00000532737 RGMBQ6NW40 437 aa29.84■■■□□ 2.37
USP48-214ENST00000532737 DHX36Q9H2U1 1008 aaKnown RBP29.84■■■□□ 2.37
USP48-214ENST00000532737 CDK5RAP2Q96SN8 1893 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 MAP3K10Q02779 954 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 GRM1Q13255 1194 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 FAM227BQ96M60 508 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 ZNF341Q9BYN7 854 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 DCP1AQ9NPI6 582 aaPredicted RBP29.83■■■□□ 2.37
USP48-214ENST00000532737 SLC4A4Q9Y6R1 1079 aa29.83■■■□□ 2.37
USP48-214ENST00000532737 SLC4A8Q2Y0W8 1093 aa29.82■■■□□ 2.36
USP48-214ENST00000532737 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.82■■■□□ 2.36
USP48-214ENST00000532737 CLMNQ96JQ2 1002 aa29.82■■■□□ 2.36
USP48-214ENST00000532737 ZNF157P51786 506 aaPredicted RBP29.81■■■□□ 2.36
USP48-214ENST00000532737 MAP3K9P80192 1104 aa29.81■■■□□ 2.36
USP48-214ENST00000532737 NMIQ13287 307 aaPredicted RBP29.81■■■□□ 2.36
USP48-214ENST00000532737 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.81■■■□□ 2.36
USP48-214ENST00000532737 HELLSQ9NRZ9 838 aa29.81■■■□□ 2.36
USP48-214ENST00000532737 ATP8A2Q9NTI2 1148 aa29.81■■■□□ 2.36
USP48-214ENST00000532737 PI4KBQ9UBF8 816 aa29.81■■■□□ 2.36
USP48-214ENST00000532737 AK9Q5TCS8 1911 aa29.81■■■□□ 2.36
USP48-214ENST00000532737 FOCADQ5VW36 1801 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 A0A0D9SFI3 127 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 FAM196BA6NMK8 535 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 AOC2O75106 756 aa29.8■■■□□ 2.36
USP48-214ENST00000532737 CCDC129Q6ZRS4 1044 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms