RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CLRN2A0PK11 232 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 ADRA2BP18089 450 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 ASIC1P78348 528 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 VPS72Q15906 364 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 ADGRB3O60242 1522 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 CHMLP26374 656 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 USH1GQ495M9 461 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 SYNCQ9H7C4 482 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 PTPRMP28827 1452 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 C21orf2O43822 256 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 CERKLQ49MI3 558 aaPredicted RBP12.8□□□□□ -0.36
PTPRK-221ENST00000532331 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 TFAP4Q01664 338 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
PTPRK-221ENST00000532331 AFMP43652 599 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 CTDSPL2Q05D32 466 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 GOLGA6L9A6NEM1 432 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 RRAGBQ5VZM2 374 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 CTNNBL1Q8WYA6 563 aaPredicted RBP12.79□□□□□ -0.36
PTPRK-221ENST00000532331 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 ADCY5O95622 1261 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 LETM2Q2VYF4 491 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 LZTS2Q9BRK4 669 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 DNA2P51530 1060 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 GINS2Q9Y248 185 aa12.79□□□□□ -0.36
PTPRK-221ENST00000532331 PLA2R1Q13018 1463 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 GSTTP1A0A1W2PQM5 241 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CHMP2AO43633 222 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CFBP00751 764 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 TRMT1Q9NXH9 659 aaKnown RBP12.78□□□□□ -0.36
PTPRK-221ENST00000532331 N4BP3O15049 544 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 LPXNO60711 386 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CCDC172P0C7W6 258 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 TNNT1P13805 278 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 OSBPP22059 807 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CCNA1P78396 465 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 MRPS27Q92552 414 aaKnown RBP12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CDC42BPAQ5VT25 1732 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CRB1P82279 1406 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 SEMA3EO15041 775 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 GRAPQ13588 217 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 RUFY3Q7L099 469 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-221ENST00000532331 AOX1Q06278 1338 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 MACROD2A1Z1Q3 448 aa12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CCDC97Q96F63 343 aaPredicted RBP12.78□□□□□ -0.36
PTPRK-221ENST00000532331 CTNNA2P26232 953 aa12.77□□□□□ -0.36
PTPRK-221ENST00000532331 R3HDM1Q15032 1099 aaKnown RBP12.77□□□□□ -0.36
PTPRK-221ENST00000532331 NCAPG2Q86XI2 1143 aa12.77□□□□□ -0.36
PTPRK-221ENST00000532331 ADCY7P51828 1080 aa12.77□□□□□ -0.36
PTPRK-221ENST00000532331 BEND3Q5T5X7 828 aa12.77□□□□□ -0.36
PTPRK-221ENST00000532331 TBC1D5Q92609 795 aa12.77□□□□□ -0.36
PTPRK-221ENST00000532331 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.36
PTPRK-221ENST00000532331 TMCO5BA8MYB1 307 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 PDE8BO95263 885 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 IREB2P48200 963 aaKnown RBP12.77□□□□□ -0.37
PTPRK-221ENST00000532331 FAM47CQ5HY64 1035 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
PTPRK-221ENST00000532331 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
PTPRK-221ENST00000532331 SNX21Q969T3 373 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 RNF181Q9P0P0 153 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 NARFQ9UHQ1 456 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 NDUFB9Q9Y6M9 179 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC91Q7Z6B0 441 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 HOOK3Q86VS8 718 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 NLRP10Q86W26 655 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 CTAGE1Q96RT6 745 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 DEXIO95424 95 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 ATP5JP18859 108 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 PROSER3Q2NL68 480 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 PNMA2Q9UL42 364 aa12.77□□□□□ -0.37
PTPRK-221ENST00000532331 ANGEL1Q9UNK9 670 aaKnown RBP12.77□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L3A6NCW0 530 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L4A6NCW7 530 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L12C9JPN9 530 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L21D6R901 530 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-221ENST00000532331 PPARAQ07869 468 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 USP17L1Q7RTZ2 530 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 DYDC1Q8WWB3 177 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 CSRNP1Q96S65 589 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 F13A1P00488 732 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 NOP2P46087 812 aaKnown RBP12.76□□□□□ -0.37
PTPRK-221ENST00000532331 DNM2P50570 870 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 IFFO1Q0D2I5 559 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 FAM47AQ5JRC9 791 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 IFT74Q96LB3 600 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 ICA1Q05084 483 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 SPAG1Q07617 926 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms