RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 ECE1P42892 770 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 MAP3K10Q02779 954 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 CCDC85BQ15834 202 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 ESCO1Q5FWF5 840 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 NKAIN3Q8N8D7 197 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 ZNF669Q96BR6 464 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 TBC1D20Q96BZ9 403 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 ZNF496Q96IT1 587 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 TBATAQ96M53 351 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 BCO2Q9BYV7 579 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 OSBPL5Q9H0X9 879 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 SLC27A5Q9Y2P5 690 aa6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 LUC7L2Q9Y383 392 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-222ENST00000531967 J3KRW8 73 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PMM2O15305 246 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 DDAH1O94760 285 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PCSK2P16519 638 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 ADD2P35612 726 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 DUSP27Q5VZP5 1158 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 IGF2-ASQ6U949 168 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 LRRTM3Q86VH5 581 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 GIMAP8Q8ND71 665 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PDGFDQ9GZP0 370 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 SPEF1Q9Y4P9 236 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 F5H423 210 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 SETSIPP0DME0 302 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PIK3CAP42336 1068 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 GALEQ14376 348 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 MORN1Q5T089 497 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 CNNM4Q6P4Q7 775 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 SRLQ86TD4 932 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 SNX32Q86XE0 403 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 STAG2Q8N3U4 1231 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 CEP120Q8N960 986 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 LEO1Q8WVC0 666 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 RUSC1Q9BVN2 902 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 OSGEPQ9NPF4 335 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 MAP4K5Q9Y4K4 846 aa6.26□□□□□ -1.41
ECHDC1-222ENST00000531967 FAM170AA1A519 330 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 B2RBV5 119 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 BACH1O14867 736 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 HNRNPCP07910 306 aaKnown RBP eCLIP6.25□□□□□ -1.413e-6■□□□□ 11
ECHDC1-222ENST00000531967 LAMC2Q13753 1193 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 STAT4Q14765 748 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 OTOP3Q7RTS5 596 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 POF1BQ8WVV4 589 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 JARID2Q92833 1246 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 SLC26A8Q96RN1 970 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 CRBNQ96SW2 442 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 KIF2CQ99661 725 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 USB1Q9BQ65 265 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 K7ENM7 598 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 HOXC13P31276 330 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 SYDE2Q5VT97 1194 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 LMBRD2Q68DH5 695 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 LDHAL6AQ6ZMR3 332 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 RNF19BQ6ZMZ0 732 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 FAM186BQ8IYM0 893 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 SLC7A3Q8WY07 619 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 TTC17Q96AE7 1141 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 RASSF1Q9NS23 344 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 TMCC3Q9ULS5 477 aa6.25□□□□□ -1.41
ECHDC1-222ENST00000531967 CD44P16070 742 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 PSMC1P62191 440 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 LONRF2Q1L5Z9 754 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 NBPF9Q3BBW0 867 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 FBXW10Q5XX13 1052 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 CHRDL2Q6WN34 429 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 CNTD1Q8N815 330 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 AP1M1Q9BXS5 423 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 DDX21Q9NR30 783 aaKnown RBP eCLIP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 MAN1C1Q9NR34 630 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 RCAN3Q9UKA8 241 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 FRMPD2Q68DX3 1309 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SYNRGQ9UMZ2 1314 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 ADCY3O60266 1144 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 PPFIA3O75145 1194 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 MYCP01106 439 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 LMNB1P20700 586 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SCNN1DP51172 638 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SFSWAPQ12872 951 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SLC9A5Q14940 896 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 FAM180BQ6P0A1 224 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SH3BP5LQ7L8J4 393 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 SPATS2Q86XZ4 545 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 GOLM1Q8NBJ4 401 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 PHC3Q8NDX5 983 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 OR6P1Q8NGX9 317 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 ESYT1Q9BSJ8 1104 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 CARD14Q9BXL6 1004 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 KIAA1586Q9HCI6 787 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 ANKIB1Q9P2G1 1089 aa6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 DDX20Q9UHI6 824 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-222ENST00000531967 GLULP15104 373 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms