RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	CERS3	Q8IU89	383 aa		31.29	■■■□□ 2.6
PICALM-215	ENST00000531558	ANKRD13A	Q8IZ07	590 aa		31.29	■■■□□ 2.6
PICALM-215	ENST00000531558	CLMN	Q96JQ2	1002 aa		31.29	■■■□□ 2.6
PICALM-215	ENST00000531558	ZIC5	Q96T25	663 aa		31.29	■■■□□ 2.6
PICALM-215	ENST00000531558	DYNLL1	P63167	89 aa	Known RBP	31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	MAP2K1	Q02750	393 aa	Predicted RBP	31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	CSRNP1	Q96S65	589 aa		31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	31.28	■■■□□ 2.6	4e-10	■■■□□ 14.7
PICALM-215	ENST00000531558	ATRNL1	Q5VV63	1379 aa		31.28	■■■□□ 2.6
PICALM-215	ENST00000531558	COL2A1	P02458	1487 aa	Predicted RBP	31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	ZNF532	Q9HCE3	1301 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	TCRBV5S4A2T	A0A5A2	114 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	ERC2	O15083	957 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	HSPA1A	P0DMV8	641 aa	Known RBP	31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	HSPA1B	P0DMV9	641 aa	Known RBP	31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	MIGA2	Q7L4E1	593 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	PI4K2B	Q8TCG2	481 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	WBP1L	Q9NX94	342 aa		31.27	■■■□□ 2.6
PICALM-215	ENST00000531558	DDTL	A6NHG4	134 aa	Predicted RBP	31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	GLRX3	O76003	335 aa	Known RBP	31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	B4GALNT3	Q6L9W6	998 aa		31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	SLC10A4	Q96EP9	437 aa		31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	ZNF341	Q9BYN7	854 aa		31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	OTOF	Q9HC10	1997 aa		31.26	■■■□□ 2.59
PICALM-215	ENST00000531558	ADD2	P35612	726 aa		31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	MAP3K9	P80192	1104 aa		31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	KIF23	Q02241	960 aa	Predicted RBP	31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	WRNIP1	Q96S55	665 aa		31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	LNPK	Q9C0E8	428 aa		31.25	■■■□□ 2.59
PICALM-215	ENST00000531558	NUCB1	Q02818	461 aa		31.24	■■■□□ 2.59
PICALM-215	ENST00000531558	TGFBRAP1	Q8WUH2	860 aa		31.24	■■■□□ 2.59
PICALM-215	ENST00000531558	RIOK1	Q9BRS2	568 aa	Known RBP	31.24	■■■□□ 2.59
PICALM-215	ENST00000531558	FLT1	P17948	1338 aa		31.24	■■■□□ 2.59
PICALM-215	ENST00000531558	VGLL4	Q14135	290 aa		31.23	■■■□□ 2.59
PICALM-215	ENST00000531558	SPRYD7	Q5W111	196 aa		31.23	■■■□□ 2.59
PICALM-215	ENST00000531558	MAPKAPK5	Q8IW41	473 aa		31.23	■■■□□ 2.59
PICALM-215	ENST00000531558	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	31.23	■■■□□ 2.59
PICALM-215	ENST00000531558	MAGEB6P1	A0A0J9YX57	407 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	CHD1L	Q86WJ1	897 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	KBTBD3	Q8NAB2	608 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	WNK4	Q96J92	1243 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	STAP2	Q9UGK3	403 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	CSAD	Q9Y600	493 aa		31.22	■■■□□ 2.59
PICALM-215	ENST00000531558	MKRN3	Q13064	507 aa	Known RBP	31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	UBE3C	Q15386	1083 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	ZSCAN25	Q6NSZ9	544 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	AIDA	Q96BJ3	306 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	ELP3	Q9H9T3	547 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	ZNF112	Q9UJU3	913 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	AK9	Q5TCS8	1911 aa		31.21	■■■□□ 2.59
PICALM-215	ENST00000531558	PDE1A	P54750	535 aa		31.2	■■■□□ 2.59
PICALM-215	ENST00000531558	SLFNL1	Q499Z3	407 aa		31.2	■■■□□ 2.59
PICALM-215	ENST00000531558	CHGB	P05060	677 aa		31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	ZBTB48	P10074	688 aa	Predicted RBP	31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	MAP3K10	Q02779	954 aa		31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	ZKSCAN4	Q969J2	545 aa	Predicted RBP	31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	DHX36	Q9H2U1	1008 aa	Known RBP	31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	SNCAIP	Q9Y6H5	919 aa		31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	FOCAD	Q5VW36	1801 aa		31.19	■■■□□ 2.58
PICALM-215	ENST00000531558	CDK5RAP2	Q96SN8	1893 aa		31.18	■■■□□ 2.58
PICALM-215	ENST00000531558	USP5	P45974	858 aa		31.18	■■■□□ 2.58
PICALM-215	ENST00000531558	REM2	Q8IYK8	340 aa	Predicted RBP	31.18	■■■□□ 2.58
PICALM-215	ENST00000531558	BEGAIN	Q9BUH8	593 aa		31.18	■■■□□ 2.58
PICALM-215	ENST00000531558	INPP5B	P32019	993 aa		31.17	■■■□□ 2.58
PICALM-215	ENST00000531558	OPTN	Q96CV9	577 aa		31.17	■■■□□ 2.58
PICALM-215	ENST00000531558	FOXN1	O15353	648 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	TBC1D12	O60347	775 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	SLURP2	P0DP57	97 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	GJA5	P36382	358 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	LCORL	Q8N3X6	602 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	MYH7	P12883	1935 aa		31.16	■■■□□ 2.58
PICALM-215	ENST00000531558	SPDYE5	A6NIY4	337 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	PHF20L1	A8MW92	1017 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	MBD4	O95243	580 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	CNKSR2	Q8WXI2	1034 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	ARMT1	Q9H993	441 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	PI4KB	Q9UBF8	816 aa		31.15	■■■□□ 2.58
PICALM-215	ENST00000531558	NOL9	Q5SY16	702 aa	Known RBP	31.14	■■■□□ 2.58
PICALM-215	ENST00000531558	SAP30BP	Q9UHR5	308 aa	Known RBP	31.14	■■■□□ 2.58
PICALM-215	ENST00000531558	PALD1	Q9ULE6	856 aa		31.14	■■■□□ 2.58
PICALM-215	ENST00000531558	SREBF2	Q12772	1141 aa		31.13	■■■□□ 2.57
PICALM-215	ENST00000531558	HERC5	Q9UII4	1024 aa	Known RBP	31.13	■■■□□ 2.57
PICALM-215	ENST00000531558	FAM196B	A6NMK8	535 aa		31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	RNF113A	O15541	343 aa	Known RBP	31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	CA12	O43570	354 aa		31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	ZFY	P08048	801 aa	Predicted RBP	31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	LRRFIP1	Q32MZ4	808 aa	Known RBP	31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	ERO1B	Q86YB8	467 aa		31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	OTUD5	Q96G74	571 aa		31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	FSD1	Q9BTV5	496 aa		31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	PUS7L	Q9H0K6	701 aa	Known RBP	31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.12	■■■□□ 2.57
PICALM-215	ENST00000531558	MANSC4	A6NHS7	340 aa	Predicted RBP	31.11	■■■□□ 2.57
PICALM-215	ENST00000531558	HLA-DOA	P06340	250 aa		31.11	■■■□□ 2.57
PICALM-215	ENST00000531558	PLEKHM2	Q8IWE5	1019 aa		31.11	■■■□□ 2.57

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