RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 BIN1O00499 593 aa7.53□□□□□ -1.2
USP47-211ENST00000531513 LEFTY1O75610 366 aa7.53□□□□□ -1.2
USP47-211ENST00000531513 CD8BP10966 210 aa7.53□□□□□ -1.2
USP47-211ENST00000531513 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
USP47-211ENST00000531513 ZNF648Q5T619 568 aaPredicted RBP7.53□□□□□ -1.2
USP47-211ENST00000531513 TMC1Q8TDI8 760 aa7.53□□□□□ -1.2
USP47-211ENST00000531513 EPS8L3Q8TE67 593 aaKnown RBP7.53□□□□□ -1.2
USP47-211ENST00000531513 RC3H2Q9HBD1 1191 aaKnown RBP7.53□□□□□ -1.2
USP47-211ENST00000531513 ADAMTS6Q9UKP5 1117 aa7.53□□□□□ -1.2
USP47-211ENST00000531513 RNGTTO60942 597 aaKnown RBP7.52□□□□□ -1.21
USP47-211ENST00000531513 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
USP47-211ENST00000531513 DTHD1Q6ZMT9 781 aa7.52□□□□□ -1.21
USP47-211ENST00000531513 PDZD3Q86UT5 571 aa7.52□□□□□ -1.21
USP47-211ENST00000531513 CSRNP1Q96S65 589 aa7.52□□□□□ -1.21
USP47-211ENST00000531513 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
USP47-211ENST00000531513 NEFMP07197 916 aa7.51□□□□□ -1.21
USP47-211ENST00000531513 FCGRTP55899 365 aa7.51□□□□□ -1.21
USP47-211ENST00000531513 HNRNPUQ00839 825 aaKnown RBP eCLIP7.51□□□□□ -1.21
USP47-211ENST00000531513 IFI16Q16666 785 aaKnown RBP7.51□□□□□ -1.21
USP47-211ENST00000531513 TMCO4Q5TGY1 634 aa7.51□□□□□ -1.21
USP47-211ENST00000531513 ATG4DQ86TL0 474 aaPredicted RBP7.51□□□□□ -1.21
USP47-211ENST00000531513 DUSP23Q9BVJ7 150 aa7.51□□□□□ -1.21
USP47-211ENST00000531513 MBNL3Q9NUK0 354 aaKnown RBP7.51□□□□□ -1.21
USP47-211ENST00000531513 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
USP47-211ENST00000531513 CEACAM5P06731 702 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 PRKCQQ04759 706 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 PI16Q6UXB8 463 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 RGS22Q8NE09 1264 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 KCNB2Q92953 911 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 ISL2Q96A47 359 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 TMEM39AQ9NV64 488 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 VAV3Q9UKW4 847 aa7.5□□□□□ -1.21
USP47-211ENST00000531513 OXCT1P55809 520 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 PPP2R3AQ06190 1150 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 ARHGAP27Q6ZUM4 889 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 SULF2Q8IWU5 870 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 TOP6BLQ8N6T0 577 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 LRRN4CLQ8ND94 238 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 FAM168AQ92567 244 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 ALKBH8Q96BT7 664 aaKnown RBP7.49□□□□□ -1.21
USP47-211ENST00000531513 DMRTB1Q96MA1 342 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 KRTAP4-11Q9BYQ6 195 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 MKNK2Q9HBH9 465 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 PCOLCE2Q9UKZ9 415 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 PLAGL2Q9UPG8 496 aa7.49□□□□□ -1.21
USP47-211ENST00000531513 ZNF124Q15973 351 aa7.48□□□□□ -1.21
USP47-211ENST00000531513 AOC3Q16853 763 aa7.48□□□□□ -1.21
USP47-211ENST00000531513 PI4K2BQ8TCG2 481 aa7.48□□□□□ -1.21
USP47-211ENST00000531513 HRASLS5Q96KN8 279 aa7.48□□□□□ -1.21
USP47-211ENST00000531513 BRD1O95696 1058 aa7.47□□□□□ -1.21
USP47-211ENST00000531513 ITIH2P19823 946 aa7.47□□□□□ -1.21
USP47-211ENST00000531513 MFAP1P55081 439 aaKnown RBP7.47□□□□□ -1.21
USP47-211ENST00000531513 RBCK1Q9BYM8 510 aa7.47□□□□□ -1.21
USP47-211ENST00000531513 TMEM265A0A087WTH1 108 aa7.46□□□□□ -1.22
USP47-211ENST00000531513 KCNA1Q09470 495 aa7.46□□□□□ -1.22
USP47-211ENST00000531513 ZC3H12AQ5D1E8 599 aaKnown RBP7.46□□□□□ -1.22
USP47-211ENST00000531513 ANGEL2Q5VTE6 544 aaKnown RBP7.46□□□□□ -1.22
USP47-211ENST00000531513 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.46□□□□□ -1.22
USP47-211ENST00000531513 BCO2Q9BYV7 579 aa7.46□□□□□ -1.22
USP47-211ENST00000531513 SSU72Q9NP77 194 aaKnown RBP7.46□□□□□ -1.22
USP47-211ENST00000531513 XRCC5P13010 732 aaKnown RBP7.45□□□□□ -1.22
USP47-211ENST00000531513 ARNTP27540 789 aa7.45□□□□□ -1.22
USP47-211ENST00000531513 ERVK-24P63145 666 aa7.45□□□□□ -1.22
USP47-211ENST00000531513 MAP1SQ66K74 1059 aaPredicted RBP7.45□□□□□ -1.22
USP47-211ENST00000531513 RNF214Q8ND24 703 aa7.45□□□□□ -1.22
USP47-211ENST00000531513 GPBAR1Q8TDU6 330 aa7.45□□□□□ -1.22
USP47-211ENST00000531513 NLRP2Q9NX02 1062 aa7.45□□□□□ -1.22
USP47-211ENST00000531513 CCER1Q8TC90 406 aaPredicted RBP7.44□□□□□ -1.22
USP47-211ENST00000531513 HEXIM2Q96MH2 286 aaKnown RBP7.44□□□□□ -1.22
USP47-211ENST00000531513 TNKS2Q9H2K2 1166 aa7.44□□□□□ -1.22
USP47-211ENST00000531513 GNEQ9Y223 722 aaKnown RBP7.44□□□□□ -1.22
USP47-211ENST00000531513 AKAP2Q9Y2D5 859 aa7.44□□□□□ -1.22
USP47-211ENST00000531513 FARP2O94887 1054 aaPredicted RBP7.43□□□□□ -1.22
USP47-211ENST00000531513 NME2P22392 152 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 ZNF252P-AS1Q0IIN9 211 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 TMC7Q7Z402 723 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 TMEM40Q8WWA1 233 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 ACSBG1Q96GR2 724 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 PPP4R2Q9NY27 417 aa7.43□□□□□ -1.22
USP47-211ENST00000531513 SOWAHDA6NJG2 315 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 DBX1A6NMT0 343 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 SLC23A3Q6PIS1 610 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 NXPE4Q6UWF7 544 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 FAM214BQ7L5A3 538 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 UBE3DQ7Z6J8 389 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 EMILIN2Q9BXX0 1053 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 CBX8Q9HC52 389 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 CACNA2D2Q9NY47 1150 aa7.42□□□□□ -1.22
USP47-211ENST00000531513 NTF4P34130 210 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 C3orf58Q8NDZ4 430 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 FLAD1Q8NFF5 587 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 SNX11Q9Y5W9 270 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 CSADQ9Y600 493 aa7.41□□□□□ -1.22
USP47-211ENST00000531513 PNMA6FA0A0J9YX94 578 aa7.4□□□□□ -1.22
USP47-211ENST00000531513 IKZF1Q13422 519 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms