RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ASTN2O75129 1339 aaPredicted RBP22.69■■□□□ 1.22
SMPD1-205ENST00000531303 TCP10L2B9ZVM9 353 aa22.69■■□□□ 1.22
SMPD1-205ENST00000531303 SLC27A2O14975 620 aa22.69■■□□□ 1.22
SMPD1-205ENST00000531303 EPB41L2O43491 1005 aaKnown RBP22.69■■□□□ 1.22
SMPD1-205ENST00000531303 SPDYE2Q495Y8 402 aa22.69■■□□□ 1.22
SMPD1-205ENST00000531303 STK11IPQ8N1F8 1099 aa22.69■■□□□ 1.22
SMPD1-205ENST00000531303 TBC1D32Q96NH3 1257 aa22.69■■□□□ 1.22
SMPD1-205ENST00000531303 USP17L12C9JPN9 530 aa22.68■■□□□ 1.22
SMPD1-205ENST00000531303 USP17L21D6R901 530 aa22.68■■□□□ 1.22
SMPD1-205ENST00000531303 CYP2D6P10635 497 aa22.68■■□□□ 1.22
SMPD1-205ENST00000531303 IMMTQ16891 758 aaKnown RBP22.68■■□□□ 1.22
SMPD1-205ENST00000531303 GIMAP6Q6P9H5 292 aa22.68■■□□□ 1.22
SMPD1-205ENST00000531303 RASEFQ8IZ41 740 aa22.68■■□□□ 1.22
SMPD1-205ENST00000531303 L3MBTL3Q96JM7 780 aaPredicted RBP22.68■■□□□ 1.22
SMPD1-205ENST00000531303 SCAF8Q9UPN6 1271 aaKnown RBP22.68■■□□□ 1.22
SMPD1-205ENST00000531303 ZNF213O14771 459 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 POLR3DP05423 398 aaPredicted RBP22.67■■□□□ 1.22
SMPD1-205ENST00000531303 CYP21A2P08686 494 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 RNF20Q5VTR2 975 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 CTR9Q6PD62 1173 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 ZFPM1Q8IX07 1006 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 ADARB2Q9NS39 739 aaKnown RBP22.67■■□□□ 1.22
SMPD1-205ENST00000531303 FAM198AQ9UFP1 575 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 MKRN1Q9UHC7 482 aaKnown RBP22.67■■□□□ 1.22
SMPD1-205ENST00000531303 HACL1Q9UJ83 578 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 TAF6LQ9Y6J9 622 aa22.67■■□□□ 1.22
SMPD1-205ENST00000531303 SMIM22K7EJ46 135 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 HIRAP54198 1017 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-205ENST00000531303 EVX2Q03828 476 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 ZKSCAN1P17029 563 aaPredicted RBP22.66■■□□□ 1.22
SMPD1-205ENST00000531303 RBM25P49756 843 aaKnown RBP22.66■■□□□ 1.22
SMPD1-205ENST00000531303 CTDSPL2Q05D32 466 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 IDI2Q9BXS1 227 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 TSHZ2Q9NRE2 1034 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 SNX14Q9Y5W7 946 aa22.66■■□□□ 1.22
SMPD1-205ENST00000531303 ZMYM6O95789 1325 aa22.65■■□□□ 1.22
SMPD1-205ENST00000531303 EPHX2P34913 555 aa22.65■■□□□ 1.22
SMPD1-205ENST00000531303 PPARAQ07869 468 aa22.65■■□□□ 1.22
SMPD1-205ENST00000531303 ZSCAN29Q8IWY8 852 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-205ENST00000531303 AMOTL1Q8IY63 956 aa22.65■■□□□ 1.22
SMPD1-205ENST00000531303 ZNF526Q8TF50 670 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-205ENST00000531303 OSBPL5Q9H0X9 879 aaPredicted RBP22.65■■□□□ 1.22
SMPD1-205ENST00000531303 LAMA4Q16363 1823 aa22.64■■□□□ 1.21
SMPD1-205ENST00000531303 POLR2AP24928 1970 aaKnown RBP22.64■■□□□ 1.21
SMPD1-205ENST00000531303 ARPP21Q9UBL0 812 aaPredicted RBP22.64■■□□□ 1.21
SMPD1-205ENST00000531303 PLCD1P51178 756 aa22.63■■□□□ 1.21
SMPD1-205ENST00000531303 ANGEL2Q5VTE6 544 aaKnown RBP22.63■■□□□ 1.21
SMPD1-205ENST00000531303 NBPF3Q9H094 633 aa22.63■■□□□ 1.21
SMPD1-205ENST00000531303 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
SMPD1-205ENST00000531303 SCN4AP35499 1836 aa22.63■■□□□ 1.21
SMPD1-205ENST00000531303 LAMB1P07942 1786 aa22.63■■□□□ 1.21
SMPD1-205ENST00000531303 IQCA1LA6NCM1 817 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 POTECB2RU33 542 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 ENTPD3O75355 529 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 SBK1Q52WX2 424 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 EAPPQ56P03 285 aaPredicted RBP22.62■■□□□ 1.21
SMPD1-205ENST00000531303 C12orf60Q5U649 245 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 TBC1D10CQ8IV04 446 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 KCNB2Q92953 911 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 TAF1DQ9H5J8 278 aaPredicted RBP22.62■■□□□ 1.21
SMPD1-205ENST00000531303 GGA3Q9NZ52 723 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 WDR90Q96KV7 1748 aa22.62■■□□□ 1.21
SMPD1-205ENST00000531303 ADCK5Q3MIX3 580 aa22.61■■□□□ 1.21
SMPD1-205ENST00000531303 STOX1Q6ZVD7 989 aa22.61■■□□□ 1.21
SMPD1-205ENST00000531303 DYNLL2Q96FJ2 89 aa22.61■■□□□ 1.21
SMPD1-205ENST00000531303 RRAGCQ9HB90 399 aa22.61■■□□□ 1.21
SMPD1-205ENST00000531303 DDX60LQ5H9U9 1706 aaKnown RBP22.61■■□□□ 1.21
SMPD1-205ENST00000531303 DDTLA6NHG4 134 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-205ENST00000531303 E7EWF7 191 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 NPM3O75607 178 aaKnown RBP22.6■■□□□ 1.21
SMPD1-205ENST00000531303 SH3BP5LQ7L8J4 393 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 JAKMIP1Q96N16 626 aaKnown RBP22.6■■□□□ 1.21
SMPD1-205ENST00000531303 TMEM39BQ9GZU3 492 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 TOMM22Q9NS69 142 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 CNTNAP1P78357 1384 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 TNNI2P48788 182 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 ANAPC15P60006 121 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 FKBP1CQ5VVH2 108 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 USP50Q70EL3 339 aaPredicted RBP22.6■■□□□ 1.21
SMPD1-205ENST00000531303 TTC6Q86TZ1 520 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 FAM151AQ8WW52 585 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 KIF2CQ99661 725 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 TACC3Q9Y6A5 838 aa22.6■■□□□ 1.21
SMPD1-205ENST00000531303 HLA-DOAP06340 250 aa22.59■■□□□ 1.21
SMPD1-205ENST00000531303 SLC3A2P08195 630 aaKnown RBP22.59■■□□□ 1.21
SMPD1-205ENST00000531303 TNFAIP1Q13829 316 aa22.59■■□□□ 1.21
SMPD1-205ENST00000531303 RASA3Q14644 834 aa22.59■■□□□ 1.21
SMPD1-205ENST00000531303 RRP12Q5JTH9 1297 aaKnown RBP22.59■■□□□ 1.21
SMPD1-205ENST00000531303 MFSD6Q6ZSS7 791 aa22.59■■□□□ 1.21
SMPD1-205ENST00000531303 ANAPC4Q9UJX5 808 aa22.59■■□□□ 1.21
SMPD1-205ENST00000531303 PRDM1O75626 825 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 KRT32Q14532 448 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 TSGA10IPQ3SY00 556 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 AKNAD1Q5T1N1 836 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 FAM83AQ86UY5 434 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 APOBEC3FQ8IUX4 373 aaKnown RBP22.58■■□□□ 1.2
SMPD1-205ENST00000531303 CDAN1Q8IWY9 1227 aa22.58■■□□□ 1.2
SMPD1-205ENST00000531303 SLURP2P0DP57 97 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 CPA1P15085 419 aa22.57■■□□□ 1.2
SMPD1-205ENST00000531303 CASTP20810 708 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms