RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 ZBTB7BO15156 539 aaPredicted RBP27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 CCDC158Q5M9N0 1113 aa27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 TTC39AQ5SRH9 613 aa27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 SH3BP5LQ7L8J4 393 aa27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 ANKRD23Q86SG2 305 aa27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 NSUN4Q96CB9 384 aaKnown RBP27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 DDX4Q9NQI0 724 aaKnown RBP27.39■■□□□ 1.98
TRAPPC4-210ENST00000531290 DDTLA6NHG4 134 aaPredicted RBP27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 PHF20L1A8MW92 1017 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 CXCL11O14625 94 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 MAP4K4O95819 1239 aaPredicted RBP27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 MCAMP43121 646 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 CAP1Q01518 475 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 TNNI3KQ59H18 835 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 FPGT-TNNI3KV9GXZ4 949 aa27.38■■□□□ 1.97
TRAPPC4-210ENST00000531290 PDHXO00330 501 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 RLBP1P12271 317 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 RHBDL3P58872 404 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 MAP3K10Q02779 954 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 SCYL3Q8IZE3 742 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 ZNF384Q8TF68 577 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 ZHX2Q9Y6X8 837 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 ZBED9Q6R2W3 1325 aa27.37■■□□□ 1.97
TRAPPC4-210ENST00000531290 RFX7Q2KHR2 1363 aa27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 ATRNL1Q5VV63 1379 aa27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 NPM3O75607 178 aaKnown RBP27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 LACTBP83111 547 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 ARMC5Q96C12 935 aa27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 DBNDD2Q9BQY9 259 aa27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 NOL10Q9BSC4 688 aaKnown RBP27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 SNRKQ9NRH2 765 aa27.35■■□□□ 1.97
TRAPPC4-210ENST00000531290 MYH13Q9UKX3 1938 aa27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 CTNND1O60716 968 aaKnown RBP27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 C17orf99Q6UX52 265 aa27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 NBPF11Q86T75 865 aa27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 CPA4Q9UI42 421 aa27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 NOP58Q9Y2X3 529 aaKnown RBP27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 LAMB1P07942 1786 aa27.34■■□□□ 1.97
TRAPPC4-210ENST00000531290 PTPRAP18433 802 aa27.33■■□□□ 1.97
TRAPPC4-210ENST00000531290 FASTKD5Q7L8L6 764 aaKnown RBP27.33■■□□□ 1.97
TRAPPC4-210ENST00000531290 GNRH1P01148 92 aa27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 MOGSQ13724 837 aa27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 SLC9C1Q4G0N8 1177 aa27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 NAA16Q6N069 864 aaPredicted RBP27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 TEX11Q8IYF3 940 aa27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 PTCH2Q9Y6C5 1203 aa27.32■■□□□ 1.96
TRAPPC4-210ENST00000531290 TBC1D12O60347 775 aa27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 BAG3O95817 575 aa27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 SLURP2P0DP57 97 aa27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 PARK7Q99497 189 aaKnown RBP27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 ARHGAP39Q9C0H5 1083 aa27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 AFG3L2Q9Y4W6 797 aa27.31■■□□□ 1.96
TRAPPC4-210ENST00000531290 POTEFA5A3E0 1075 aa27.3■■□□□ 1.96
TRAPPC4-210ENST00000531290 ZNF512BQ96KM6 892 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC4-210ENST00000531290 TMEM106CQ9BVX2 250 aa27.3■■□□□ 1.96
TRAPPC4-210ENST00000531290 OSBPL5Q9H0X9 879 aaPredicted RBP27.3■■□□□ 1.96
TRAPPC4-210ENST00000531290 A0A0G2JLL6 359 aaPredicted RBP27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 ECM2O94769 699 aaPredicted RBP27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 MS4A1P11836 297 aa27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 PRMT2P55345 433 aa27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 GPAT2Q6NUI2 795 aa27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 PRRT2Q7Z6L0 340 aaPredicted RBP27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 PANK1Q8TE04 598 aa27.29■■□□□ 1.96
TRAPPC4-210ENST00000531290 CYP2E1P05181 493 aaPredicted RBP27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 PLCG2P16885 1265 aa27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 CEP85Q6P2H3 762 aa27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 GADL1Q6ZQY3 521 aa27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 SH3RF3Q8TEJ3 882 aaPredicted RBP27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 ZNF333Q96JL9 665 aa27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 CCDC8Q9H0W5 538 aaPredicted RBP27.28■■□□□ 1.96
TRAPPC4-210ENST00000531290 FMNL1O95466 1100 aaPredicted RBP27.27■■□□□ 1.96
TRAPPC4-210ENST00000531290 HOXD10P28358 340 aa27.27■■□□□ 1.96
TRAPPC4-210ENST00000531290 PSMC4P43686 418 aa27.27■■□□□ 1.96
TRAPPC4-210ENST00000531290 AATFQ9NY61 560 aaKnown RBP eCLIP27.27■■□□□ 1.96
TRAPPC4-210ENST00000531290 DBNLQ9UJU6 430 aaKnown RBP27.27■■□□□ 1.96
TRAPPC4-210ENST00000531290 HTTP42858 3142 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 TRIM75PA6NK02 468 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 FAM196BA6NMK8 535 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 IGSF3O75054 1194 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 CYP2C8P10632 490 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 ZAP70P43403 619 aa27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 PRPF38BQ5VTL8 546 aaKnown RBP27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 EAF2Q96CJ1 260 aaPredicted RBP27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 TNRC18O15417 2968 aaPredicted RBP27.26■■□□□ 1.95
TRAPPC4-210ENST00000531290 PPP4CP60510 307 aa27.25■■□□□ 1.95
TRAPPC4-210ENST00000531290 ERC1Q8IUD2 1116 aa27.25■■□□□ 1.95
TRAPPC4-210ENST00000531290 MYH2Q9UKX2 1941 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 ADGRA2Q96PE1 1338 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 SLC4A8Q2Y0W8 1093 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 TRIM47Q96LD4 638 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 DHX36Q9H2U1 1008 aaKnown RBP27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 TLR7Q9NYK1 1049 aaKnown RBP27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 PI4KBQ9UBF8 816 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 SLC45A1Q9Y2W3 748 aa27.24■■□□□ 1.95
TRAPPC4-210ENST00000531290 EN2P19622 333 aaPredicted RBP27.23■■□□□ 1.95
TRAPPC4-210ENST00000531290 SH3TC2Q8TF17 1288 aa27.23■■□□□ 1.95
TRAPPC4-210ENST00000531290 TGFBRAP1Q8WUH2 860 aa27.23■■□□□ 1.95
TRAPPC4-210ENST00000531290 PIH1D3Q9NQM4 214 aaKnown RBP27.23■■□□□ 1.95
TRAPPC4-210ENST00000531290 SRRDQ9UH36 339 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms