RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 NOL9Q5SY16 702 aaKnown RBP11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 MTMR10Q9NXD2 777 aa11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 PTPRCP08575 1304 aa11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
CHMP4A-205ENST00000531158 DDX60LQ5H9U9 1706 aaKnown RBP11.52□□□□□ -0.56
CHMP4A-205ENST00000531158 VCANP13611 3396 aa11.52□□□□□ -0.56
CHMP4A-205ENST00000531158 ANP32CO43423 234 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 CCL5P13501 91 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 GRK4P32298 578 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 GJA8P48165 433 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 KIF22Q14807 665 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 FAM9BQ8IZU0 186 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 WDR66Q8TBY9 1149 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 LPIN2Q92539 896 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 HOOK2Q96ED9 719 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 GABRQQ9UN88 632 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 SALL1Q9NSC2 1324 aa11.52□□□□□ -0.57
CHMP4A-205ENST00000531158 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 SPTBN5Q9NRC6 3674 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 GJB1P08034 283 aa11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 PHKA1P46020 1223 aa11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 MAST2Q6P0Q8 1798 aa11.51□□□□□ -0.57
CHMP4A-205ENST00000531158 A0A0G2JLL6 359 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 EVI5O60447 810 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 WDHD1O75717 1129 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 FMNL1O95466 1100 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 SLC5A1P13866 664 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 ADORA1P30542 326 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 RGS3P49796 1198 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 PRRT2Q7Z6L0 340 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 CCDC84Q86UT8 332 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 NKX2-3Q8TAU0 364 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 ZNF384Q8TF68 577 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 SIL1Q9H173 461 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 DDX4Q9NQI0 724 aaKnown RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 USP40Q9NVE5 1235 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 GAKO14976 1311 aa11.5□□□□□ -0.57
CHMP4A-205ENST00000531158 DDTLA6NHG4 134 aaPredicted RBP11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 CXCL11O14625 94 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 ELNP15502 786 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 PTPRAP18433 802 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 SCYL3Q8IZE3 742 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 U2AF1L4Q8WU68 220 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 IDI2Q9BXS1 227 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 RNF208Q9H0X6 261 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 RAPGEFL1Q9UHV5 662 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 PA2G4Q9UQ80 394 aaKnown RBP11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
CHMP4A-205ENST00000531158 CIAO1O76071 339 aa11.48□□□□□ -0.57
CHMP4A-205ENST00000531158 LDHBP07195 334 aaKnown RBP11.48□□□□□ -0.57
CHMP4A-205ENST00000531158 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
CHMP4A-205ENST00000531158 PARK7Q99497 189 aaKnown RBP11.48□□□□□ -0.57
CHMP4A-205ENST00000531158 ZHX2Q9Y6X8 837 aa11.48□□□□□ -0.57
CHMP4A-205ENST00000531158 ZBTB22O15209 634 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 ENTPD3O75355 529 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 PLA2G5P39877 138 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 FLT3LGP49771 235 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 FCGRTP55899 365 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 TREML2Q5T2D2 321 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 CCDC102BQ68D86 513 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 SLAIN1Q8ND83 568 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 FAM122AQ96E09 287 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 CDCA7LQ96GN5 454 aa11.47□□□□□ -0.57
CHMP4A-205ENST00000531158 LAMA2P24043 3122 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 FAM196BA6NMK8 535 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 SEMA3EO15041 775 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 ADCY3O60266 1144 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 FARP2O94887 1054 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 SGPL1O95470 568 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 INHAP05111 366 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 HOXD10P28358 340 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 RHBDL3P58872 404 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 GADL1Q6ZQY3 521 aa11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 PAK6Q9NQU5 681 aaPredicted RBP11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
CHMP4A-205ENST00000531158 DNAH12Q6ZR08 3092 aa11.46□□□□□ -0.58
CHMP4A-205ENST00000531158 MYH1P12882 1939 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 PDS5AQ29RF7 1337 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 BMP8BP34820 402 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 BTDP43251 543 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 LRIT3Q3SXY7 679 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 DIS3LQ8TF46 1054 aaKnown RBP11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 COPRSQ9NQ92 184 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 CEP126Q9P2H0 1117 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 BIN2Q9UBW5 565 aaPredicted RBP11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 DENND2AQ9ULE3 1009 aa11.45□□□□□ -0.58
CHMP4A-205ENST00000531158 SLC45A1Q9Y2W3 748 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms