RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PAIP2Q9BPZ3 127 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 GOLGA6AQ9NYA3 693 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 TUBE1Q9UJT0 475 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 USP31Q70CQ4 1352 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 USP14P54578 494 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 EIF4A2Q14240 407 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 DRAXINQ8NBI3 349 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 MRPL44Q9H9J2 332 aaKnown RBP9.24□□□□□ -0.93
CSDE1-214ENST00000530886 INTS13Q9NVM9 706 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 RPS6KL1Q9Y6S9 549 aa9.24□□□□□ -0.93
CSDE1-214ENST00000530886 MINK1Q8N4C8 1332 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 MYH8P13535 1937 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 CTAGE9A4FU28 777 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 PES1O00541 588 aaKnown RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 KIF5CO60282 957 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 FECHP22830 423 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 AMPD2Q01433 879 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 MYL5Q02045 173 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 UBE3BQ7Z3V4 1068 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 OR8K1Q8NGG5 319 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 DPF2Q92785 391 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 PUF60Q9UHX1 559 aaKnown RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 LIN7AO14910 233 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 SLC27A2O14975 620 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 CTDNEP1O95476 244 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 GGCXP38435 758 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 NME9Q86XW9 330 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 RPGRIP1Q96KN7 1286 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 TMX4Q9H1E5 349 aaPredicted RBP9.23□□□□□ -0.93
CSDE1-214ENST00000530886 RTEL1Q9NZ71 1219 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 PIK3C2AO00443 1686 aa9.23□□□□□ -0.93
CSDE1-214ENST00000530886 SLMAPQ14BN4 828 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 PARP9Q8IXQ6 854 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC148Q8NFR7 591 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 FTOQ9C0B1 505 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 SLC40A1Q9NP59 571 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 HMG20BQ9P0W2 317 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 ATP1A3P13637 1013 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 ATP5JP18859 108 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 NAP1L1P55209 391 aaKnown RBP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 MTX1Q13505 466 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 SAFB2Q14151 953 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 BLOC1S2Q6QNY1 142 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 C6orf89Q6UWU4 347 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 RASGRP2Q7LDG7 609 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 C3orf20Q8ND61 904 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 TECPR2O15040 1411 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 EME2A4GXA9 379 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 JAK2O60674 1132 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 GLRX3O76003 335 aaKnown RBP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 GNGT1P63211 74 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 FLIIQ13045 1269 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 C14orf37Q86TY3 774 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 CCDC13Q8IYE1 715 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 SDF4Q9BRK5 362 aa9.22□□□□□ -0.93
CSDE1-214ENST00000530886 RBM8AQ9Y5S9 174 aaKnown RBP9.22□□□□□ -0.93
CSDE1-214ENST00000530886 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 H3BQV1 296 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 HIP1O00291 1037 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 ZNF202O95125 648 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 SLC3A2P08195 630 aaKnown RBP9.21□□□□□ -0.93
CSDE1-214ENST00000530886 RHOXF2BP0C7M4 288 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.93
CSDE1-214ENST00000530886 RAB27AP51159 221 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 IFFO2Q5TF58 517 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 SAAL1Q96ER3 474 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 RHOXF2Q9BQY4 288 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 MYO6Q9UM54 1294 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.93
CSDE1-214ENST00000530886 H7C1W4 665 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 SERPINC1P01008 464 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 GCKP35557 465 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 MTA1Q13330 715 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 PDIA5Q14554 519 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 CFAP100Q494V2 611 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-214ENST00000530886 NAPGQ99747 312 aaPredicted RBP9.21□□□□□ -0.94
CSDE1-214ENST00000530886 CPSF2Q9P2I0 782 aaKnown RBP9.21□□□□□ -0.94
CSDE1-214ENST00000530886 PCDHA7Q9UN72 937 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 LAMB4A4D0S4 1761 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 CDR1P51861 262 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 AGXT2Q9BYV1 514 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 ZSWIM4Q9H7M6 989 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 EBF2Q9HAK2 575 aa9.21□□□□□ -0.94
CSDE1-214ENST00000530886 TTF2Q9UNY4 1162 aaKnown RBP9.21□□□□□ -0.94
CSDE1-214ENST00000530886 TULP1O00294 542 aaPredicted RBP9.2□□□□□ -0.94
CSDE1-214ENST00000530886 AHCYL1O43865 530 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 FESP07332 822 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 NDUFA8P51970 172 aa9.2□□□□□ -0.94
CSDE1-214ENST00000530886 RRS1Q15050 365 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms