RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.81□□□□□ -1.48
SSBP3-213ENST00000530618 DENND2AQ9ULE3 1009 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 FPGT-TNNI3KV9GXZ4 949 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 PLXNB2O15031 1838 aa5.81□□□□□ -1.48
SSBP3-213ENST00000530618 RFX7Q2KHR2 1363 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ATRNL1Q5VV63 1379 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ADGRA2Q96PE1 1338 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 MANSC4A6NHS7 340 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 F8W031 263 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 HIP1O00291 1037 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 MX1P20591 662 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 CRHR2Q13324 411 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 TTLL12Q14166 644 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ZSCAN25Q6NSZ9 544 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 TICAM2Q86XR7 235 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 CERS3Q8IU89 383 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 SIRT2Q8IXJ6 389 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 BRI3BPQ8WY22 251 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ARMC5Q96C12 935 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 NOL10Q9BSC4 688 aaKnown RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 LNPKQ9C0E8 428 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 TMEM39BQ9GZU3 492 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 TDRD3Q9H7E2 651 aaKnown RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 IL1RAPL2Q9NP60 686 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ECHDC1Q9NTX5 307 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 ZNF70Q9UC06 446 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 SERPINA10Q9UK55 444 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 HDAC9Q9UKV0 1011 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 DNAH12Q6ZR08 3092 aa5.8□□□□□ -1.48
SSBP3-213ENST00000530618 RPAP1Q9BWH6 1393 aaPredicted RBP5.8□□□□□ -1.48
SSBP3-213ENST00000530618 A0A0C4DFX4 3053 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 CDH23Q9H251 3354 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 IGHDP01880 384 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 CTGFP29279 349 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 NF2P35240 595 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 CRKP46108 304 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 MFAP1P55081 439 aaKnown RBP5.79□□□□□ -1.48
SSBP3-213ENST00000530618 GSTO1P78417 241 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 MOGSQ13724 837 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 VGLL4Q14135 290 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 MFSD14BQ5SR56 506 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 APOBEC3HQ6NTF7 200 aaKnown RBP5.79□□□□□ -1.48
SSBP3-213ENST00000530618 ATG9AQ7Z3C6 839 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 FAM43AQ8N2R8 423 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 WDR66Q8TBY9 1149 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 CD99L2Q8TCZ2 262 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.79□□□□□ -1.48
SSBP3-213ENST00000530618 XAGE2Q96GT9 111 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 ZNF512BQ96KM6 892 aaPredicted RBP5.79□□□□□ -1.48
SSBP3-213ENST00000530618 VEZTQ9HBM0 779 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 TTF2Q9UNY4 1162 aaKnown RBP5.79□□□□□ -1.48
SSBP3-213ENST00000530618 PTPN22Q9Y2R2 807 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 SUGT1Q9Y2Z0 365 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 SNCAIPQ9Y6H5 919 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 MAST2Q6P0Q8 1798 aa5.79□□□□□ -1.48
SSBP3-213ENST00000530618 PDS5AQ29RF7 1337 aaKnown RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 CUL9Q8IWT3 2517 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 SPDYE5A6NIY4 337 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 TRIM6-TRIM34B2RNG4 842 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ZBTB22O15209 634 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ALDH1A1P00352 501 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ZFYP08048 801 aaPredicted RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ATP5JP18859 108 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 CACNB3P54284 484 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 INHBEP58166 350 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 HDLBPQ00341 1268 aaKnown RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 MAP3K12Q12852 859 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 CCDC102BQ68D86 513 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 DZIP1Q86YF9 867 aaKnown RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ANKRD13AQ8IZ07 590 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 RUFY2Q8WXA3 655 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 OPTNQ96CV9 577 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 SLC10A4Q96EP9 437 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 DDRGK1Q96HY6 314 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 CCDC8Q9H0W5 538 aaPredicted RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 ELP3Q9H9T3 547 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 IQSEC3Q9UPP2 1182 aaPredicted RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 TRIM17Q9Y577 477 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 FRMPD3Q5JV73 1810 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 UNC80Q8N2C7 3258 aa5.78□□□□□ -1.48
SSBP3-213ENST00000530618 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
SSBP3-213ENST00000530618 VCANP13611 3396 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 EYSQ5T1H1 3165 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 TCP10L2B9ZVM9 353 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 MYO1BO43795 1136 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 PPP1R12BO60237 982 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-213ENST00000530618 SMARCA5O60264 1052 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-213ENST00000530618 LDHBP07195 334 aaKnown RBP5.77□□□□□ -1.49
SSBP3-213ENST00000530618 LDHCP07864 332 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 ARID4AP29374 1257 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-213ENST00000530618 RGS3P49796 1198 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 BCAMP50895 628 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 PDE1AP54750 535 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 TIMM10P62072 90 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 CHAF1AQ13111 956 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-213ENST00000530618 SUPT20HL1Q3ZLR7 823 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 FKBP1CQ5VVH2 108 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 ERICH6Q7L0X2 663 aa5.77□□□□□ -1.49
SSBP3-213ENST00000530618 SPATA5Q8NB90 893 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms