RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 ENOX2Q16206 610 aaKnown RBP5.63□□□□□ -1.51
NUP98-218ENST00000530516 AEBP1Q8IUX7 1158 aa5.63□□□□□ -1.51
NUP98-218ENST00000530516 ASB16Q96NS5 453 aa5.63□□□□□ -1.51
NUP98-218ENST00000530516 FANCD2OSQ96PS1 177 aa5.63□□□□□ -1.51
NUP98-218ENST00000530516 SETDB2Q96T68 719 aa5.63□□□□□ -1.51
NUP98-218ENST00000530516 PNMA6FA0A0J9YX94 578 aa5.62□□□□□ -1.51
NUP98-218ENST00000530516 GADD45BO75293 160 aaPredicted RBP5.62□□□□□ -1.51
NUP98-218ENST00000530516 SPRED2Q7Z698 418 aa5.62□□□□□ -1.51
NUP98-218ENST00000530516 WFDC3Q8IUB2 231 aa5.62□□□□□ -1.51
NUP98-218ENST00000530516 BHLHE22Q8NFJ8 381 aaPredicted RBP5.62□□□□□ -1.51
NUP98-218ENST00000530516 HRASLS5Q96KN8 279 aa5.62□□□□□ -1.51
NUP98-218ENST00000530516 CCDC86Q9H6F5 360 aaKnown RBP5.62□□□□□ -1.51
NUP98-218ENST00000530516 RC3H2Q9HBD1 1191 aaKnown RBP5.62□□□□□ -1.51
NUP98-218ENST00000530516 SNX11Q9Y5W9 270 aa5.62□□□□□ -1.51
NUP98-218ENST00000530516 DBX1A6NMT0 343 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 CEACAM5P06731 702 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 LIG1P18858 919 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 PLCB3Q01970 1234 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 ANGEL2Q5VTE6 544 aaKnown RBP5.61□□□□□ -1.51
NUP98-218ENST00000530516 ZNF574Q6ZN55 896 aaPredicted RBP5.61□□□□□ -1.51
NUP98-218ENST00000530516 PLD6Q8N2A8 252 aaKnown RBP5.61□□□□□ -1.51
NUP98-218ENST00000530516 PI4K2BQ8TCG2 481 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 FAM168AQ92567 244 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 SLC38A3Q99624 504 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 TMEM39AQ9NV64 488 aa5.61□□□□□ -1.51
NUP98-218ENST00000530516 PATL2C9JE40 543 aaKnown RBP5.6□□□□□ -1.51
NUP98-218ENST00000530516 CD8BP10966 210 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 CDK5R2Q13319 367 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 KRTAP19-4Q3LI73 84 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 SLC23A3Q6PIS1 610 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 DTHD1Q6ZMT9 781 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 SND1Q7KZF4 910 aaKnown RBP eCLIP5.6□□□□□ -1.51
NUP98-218ENST00000530516 EMILIN2Q9BXX0 1053 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 DISC1Q9NRI5 854 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 FAM53CQ9NYF3 392 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 PCDHGC5Q9Y5F6 944 aa5.6□□□□□ -1.51
NUP98-218ENST00000530516 ZNF862O60290 1169 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 RNGTTO60942 597 aaKnown RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 OXCT1P55809 520 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 ERVK-24P63145 666 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 FAAP100Q0VG06 881 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 TTLL4Q14679 1199 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.59□□□□□ -1.51
NUP98-218ENST00000530516 KSR1Q8IVT5 923 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 ZSCAN29Q8IWY8 852 aaPredicted RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 FLAD1Q8NFF5 587 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 LGR6Q9HBX8 967 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 MBNL3Q9NUK0 354 aaKnown RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 NLRP2Q9NX02 1062 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 GTF2IRD1Q9UHL9 959 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 WWC3Q9ULE0 1092 aa5.59□□□□□ -1.51
NUP98-218ENST00000530516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.59□□□□□ -1.51
NUP98-218ENST00000530516 CARMIL2Q6F5E8 1435 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 IGF2BP3O00425 579 aaKnown RBP eCLIP5.58□□□□□ -1.52
NUP98-218ENST00000530516 RNASE1P07998 156 aaKnown RBP5.58□□□□□ -1.52
NUP98-218ENST00000530516 BNIP3Q12983 259 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 AOC3Q16853 763 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 RNF214Q8ND24 703 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 ASB11Q8WXH4 323 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 WDR89Q96FK6 387 aaPredicted RBP5.58□□□□□ -1.52
NUP98-218ENST00000530516 BCO2Q9BYV7 579 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 TNKS2Q9H2K2 1166 aa5.58□□□□□ -1.52
NUP98-218ENST00000530516 SSU72Q9NP77 194 aaKnown RBP5.58□□□□□ -1.52
NUP98-218ENST00000530516 MAPK8P45983 427 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 ZNF648Q5T619 568 aaPredicted RBP5.57□□□□□ -1.52
NUP98-218ENST00000530516 SCARA3Q6AZY7 606 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 NXPE4Q6UWF7 544 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 DNAJC14Q6Y2X3 702 aaPredicted RBP5.57□□□□□ -1.52
NUP98-218ENST00000530516 PDZD3Q86UT5 571 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.57□□□□□ -1.52
NUP98-218ENST00000530516 FAM181AQ8N9Y4 354 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 C3orf58Q8NDZ4 430 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 SAMM50Q9Y512 469 aa5.57□□□□□ -1.52
NUP98-218ENST00000530516 HCLS1P14317 486 aaPredicted RBP5.56□□□□□ -1.52
NUP98-218ENST00000530516 NME2P22392 152 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 ARNTP27540 789 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 FCGRTP55899 365 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 ZC3H12AQ5D1E8 599 aaKnown RBP5.56□□□□□ -1.52
NUP98-218ENST00000530516 SULF2Q8IWU5 870 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 KCT2Q8NC54 265 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 LRRN4CLQ8ND94 238 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 FBF1Q8TES7 1133 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 KCNB2Q92953 911 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 FAM84AQ96KN4 292 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 OSBPL7Q9BZF2 842 aa5.56□□□□□ -1.52
NUP98-218ENST00000530516 ZC3H12CQ9C0D7 883 aaKnown RBP5.56□□□□□ -1.52
NUP98-218ENST00000530516 ANKRD33BA6NCL7 494 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 ZNF157P51786 506 aaPredicted RBP5.55□□□□□ -1.52
NUP98-218ENST00000530516 CLCN7P51798 805 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 ZSWIM9Q86XI8 627 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 TOP6BLQ8N6T0 577 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 ISL2Q96A47 359 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 PPP1R16BQ96T49 567 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 RNF19AQ9NV58 838 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 ADAMTS6Q9UKP5 1117 aa5.55□□□□□ -1.52
NUP98-218ENST00000530516 LEFTY1O75610 366 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms