RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 A0A1W2PP64 1363 aa12.12□□□□□ -0.47
CCDC90B-217ENST00000530253 WASHC2AQ641Q2 1341 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 SBNO1A3KN83 1393 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 ANKRD36BQ8N2N9 1353 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 XPCQ01831 940 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 FAM13BQ9NYF5 915 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 COL22A1Q8NFW1 1626 aaPredicted RBP12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 TNS3Q68CZ2 1445 aa12.11□□□□□ -0.47
CCDC90B-217ENST00000530253 GDF6Q6KF10 455 aaPredicted RBP12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 KRT28Q7Z3Y7 464 aa12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 IL22RA1Q8N6P7 574 aa12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 NSUN5Q96P11 429 aaKnown RBP12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 USP20Q9Y2K6 914 aa12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
CCDC90B-217ENST00000530253 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
CCDC90B-217ENST00000530253 PNPLA6Q8IY17 1366 aa12.09□□□□□ -0.47
CCDC90B-217ENST00000530253 MMP20O60882 483 aa12.09□□□□□ -0.47
CCDC90B-217ENST00000530253 KCNMB2Q9Y691 235 aa12.09□□□□□ -0.47
CCDC90B-217ENST00000530253 PIK3C2AO00443 1686 aa12.09□□□□□ -0.47
CCDC90B-217ENST00000530253 CRYBG1Q9Y4K1 1723 aa12.08□□□□□ -0.47
CCDC90B-217ENST00000530253 KRTAP9-6A0A140TA67 174 aa12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 J3QW42 95 aa12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 COX20Q5RI15 118 aa12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 NLRP13Q86W25 1043 aa12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 TMC1Q8TDI8 760 aa12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 NOVA2Q9UNW9 492 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 EDC4Q6P2E9 1401 aaKnown RBP12.08□□□□□ -0.48
CCDC90B-217ENST00000530253 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 USP54Q70EL1 1684 aa12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 ABCA3Q99758 1704 aa12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 MARF1Q9Y4F3 1742 aaKnown RBP12.07□□□□□ -0.48
CCDC90B-217ENST00000530253 GSC2O15499 205 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 FSTP19883 344 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 MEX3CQ5U5Q3 659 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 COL26A1Q96A83 441 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 LRRC59Q96AG4 307 aaKnown RBP12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 SPATA31A6Q5VVP1 1343 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 TTC21BQ7Z4L5 1316 aa12.06□□□□□ -0.48
CCDC90B-217ENST00000530253 C16orf46Q6P387 395 aa12.05□□□□□ -0.48
CCDC90B-217ENST00000530253 Q6ZS46 218 aa12.05□□□□□ -0.48
CCDC90B-217ENST00000530253 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
CCDC90B-217ENST00000530253 PHRF1Q9P1Y6 1649 aaKnown RBP12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 NSD3Q9BZ95 1437 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 PIK3R5Q8WYR1 880 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 POLR3GLQ9BT43 218 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 PPME1Q9Y570 386 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 SLIT3O75094 1523 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
CCDC90B-217ENST00000530253 OVOS2A0A0J9YW53 1432 aa12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 OVOS2Q6IE36 1432 aa12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 SPACA7Q96KW9 195 aa12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 FNDC3AQ9Y2H6 1198 aaKnown RBP12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 USP19O94966 1318 aa12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 TTC21AQ8NDW8 1320 aa12.03□□□□□ -0.48
CCDC90B-217ENST00000530253 ALX3O95076 343 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 GLB1P16278 677 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 ELOAQ14241 798 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 NME9Q86XW9 330 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 ETFBKMTQ8IXQ9 262 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 PRIMPOLQ96LW4 560 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 PANK3Q9H999 370 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 TRIM33Q9UPN9 1127 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
CCDC90B-217ENST00000530253 HYAL2Q12891 473 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 OR13H1Q8NG92 308 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 C8orf37Q96NL8 207 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 CEP41Q9BYV8 373 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 AFF2P51816 1311 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 NFAT5O94916 1531 aa12□□□□□ -0.49
CCDC90B-217ENST00000530253 PRMT3O60678 531 aa11.99□□□□□ -0.49
CCDC90B-217ENST00000530253 SMNDC1O75940 238 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC90B-217ENST00000530253 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-217ENST00000530253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC90B-217ENST00000530253 RAXQ9Y2V3 346 aa11.99□□□□□ -0.49
CCDC90B-217ENST00000530253 ANKRD26Q9UPS8 1709 aa11.98□□□□□ -0.49
CCDC90B-217ENST00000530253 FYB1O15117 783 aa11.98□□□□□ -0.49
CCDC90B-217ENST00000530253 TRIP4Q15650 581 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-217ENST00000530253 OCLNQ16625 522 aa11.98□□□□□ -0.49
CCDC90B-217ENST00000530253 ABTB2Q8N961 1025 aa11.98□□□□□ -0.49
CCDC90B-217ENST00000530253 FAM177BA6PVY3 158 aa11.97□□□□□ -0.49
CCDC90B-217ENST00000530253 UVSSAQ2YD98 709 aa11.97□□□□□ -0.49
CCDC90B-217ENST00000530253 TTC39BQ5VTQ0 682 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-217ENST00000530253 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
CCDC90B-217ENST00000530253 NSD2O96028 1365 aa11.96□□□□□ -0.49
CCDC90B-217ENST00000530253 DHX15O43143 795 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-217ENST00000530253 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-217ENST00000530253 FAM117BQ6P1L5 589 aa11.96□□□□□ -0.49
CCDC90B-217ENST00000530253 CPDO75976 1380 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
CCDC90B-217ENST00000530253 CGNL1Q0VF96 1302 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms