RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 SOGA3Q5TF21 947 aa18.03■□□□□ 0.48
RDX-209ENST00000530131 NOL10Q9BSC4 688 aaKnown RBP18.03■□□□□ 0.48
RDX-209ENST00000530131 KRT23Q9C075 422 aa18.03■□□□□ 0.48
RDX-209ENST00000530131 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.48
RDX-209ENST00000530131 PFKFB2O60825 505 aa18.02■□□□□ 0.48
RDX-209ENST00000530131 NUCB2P80303 420 aa18.02■□□□□ 0.48
RDX-209ENST00000530131 RNF41Q9H4P4 317 aaPredicted RBP18.02■□□□□ 0.48
RDX-209ENST00000530131 ARPP21Q9UBL0 812 aaPredicted RBP18.02■□□□□ 0.48
RDX-209ENST00000530131 ZDHHC9Q9Y397 364 aa18.02■□□□□ 0.48
RDX-209ENST00000530131 YDJCA8MPS7 323 aa18.02■□□□□ 0.47
RDX-209ENST00000530131 EVX2Q03828 476 aa18.02■□□□□ 0.47
RDX-209ENST00000530131 TNPO1Q92973 898 aaKnown RBP18.02■□□□□ 0.47
RDX-209ENST00000530131 ZNF274Q96GC6 653 aaPredicted RBP18.02■□□□□ 0.47
RDX-209ENST00000530131 TTF2Q9UNY4 1162 aaKnown RBP18.02■□□□□ 0.47
RDX-209ENST00000530131 ECM29Q5VYK3 1845 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 USP17L3A6NCW0 530 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 USP17L4A6NCW7 530 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 SH2B2O14492 632 aaPredicted RBP18.01■□□□□ 0.47
RDX-209ENST00000530131 KDM4AO75164 1064 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 PLCG2P16885 1265 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 STK3Q13188 491 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
RDX-209ENST00000530131 USP17L1Q7RTZ2 530 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
RDX-209ENST00000530131 MYH1P12882 1939 aa18■□□□□ 0.47
RDX-209ENST00000530131 F8W031 263 aaPredicted RBP18■□□□□ 0.47
RDX-209ENST00000530131 CYP2D6P10635 497 aa18■□□□□ 0.47
RDX-209ENST00000530131 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
RDX-209ENST00000530131 TMEM87BQ96K49 555 aa18■□□□□ 0.47
RDX-209ENST00000530131 VPS33BQ9H267 617 aa18■□□□□ 0.47
RDX-209ENST00000530131 SMC3Q9UQE7 1217 aa18■□□□□ 0.47
RDX-209ENST00000530131 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18■□□□□ 0.47
RDX-209ENST00000530131 ROBO3Q96MS0 1386 aa18■□□□□ 0.47
RDX-209ENST00000530131 PCP11498 1178 aaKnown RBP18■□□□□ 0.47
RDX-209ENST00000530131 PDIA3P30101 505 aaKnown RBP18■□□□□ 0.47
RDX-209ENST00000530131 USP5P45974 858 aa18■□□□□ 0.47
RDX-209ENST00000530131 SCRN1Q12765 414 aa18■□□□□ 0.47
RDX-209ENST00000530131 HHIPL2Q6UWX4 724 aa18■□□□□ 0.47
RDX-209ENST00000530131 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
RDX-209ENST00000530131 BRPF3Q9ULD4 1205 aa18■□□□□ 0.47
RDX-209ENST00000530131 ANGEL1Q9UNK9 670 aaKnown RBP18■□□□□ 0.47
RDX-209ENST00000530131 USP17L8P0C7I0 530 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 C12orf60Q5U649 245 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 TEX11Q8IYF3 940 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 MTA3Q9BTC8 594 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 ZNF277Q9NRM2 450 aaPredicted RBP17.99■□□□□ 0.47
RDX-209ENST00000530131 MCM9Q9NXL9 1143 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 ARFGEF1Q9Y6D6 1849 aa17.99■□□□□ 0.47
RDX-209ENST00000530131 GOLGB1Q14789 3259 aaKnown RBP17.98■□□□□ 0.47
RDX-209ENST00000530131 ORC4O43929 436 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 BRD1O95696 1058 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 GJB2P29033 226 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 SCNN1DP51172 638 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 CLEC17AQ6ZS10 378 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 STK11IPQ8N1F8 1099 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 MRIQ9BWK5 157 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 HPS5Q9UPZ3 1129 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 FLT1P17948 1338 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 DTNBO60941 627 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 NBR1Q14596 966 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 RRP12Q5JTH9 1297 aaKnown RBP17.98■□□□□ 0.47
RDX-209ENST00000530131 SGMS1Q86VZ5 419 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 MAPKAPK5Q8IW41 473 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 SENP2Q9HC62 589 aa17.98■□□□□ 0.47
RDX-209ENST00000530131 PPP1R1BQ9UD71 204 aaPredicted RBP17.98■□□□□ 0.47
RDX-209ENST00000530131 KLF18A0A0U1RQI7 1052 aa17.97■□□□□ 0.47
RDX-209ENST00000530131 LIFRP42702 1097 aa17.97■□□□□ 0.47
RDX-209ENST00000530131 HDLBPQ00341 1268 aaKnown RBP17.97■□□□□ 0.47
RDX-209ENST00000530131 CRKP46108 304 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 APOBEC3HQ6NTF7 200 aaKnown RBP17.96■□□□□ 0.47
RDX-209ENST00000530131 KIAA0825Q8IV33 1275 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 SMARCC2Q8TAQ2 1214 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 ESR2Q92731 530 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 ZDHHC15Q96MV8 337 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 LLPHQ9BRT6 129 aaKnown RBP17.96■□□□□ 0.47
RDX-209ENST00000530131 TOMM22Q9NS69 142 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 CTDNEP1O95476 244 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 TMEM67Q5HYA8 995 aa17.96■□□□□ 0.47
RDX-209ENST00000530131 IFIT3O14879 490 aaKnown RBP17.95■□□□□ 0.46
RDX-209ENST00000530131 PRDM1O75626 825 aa17.95■□□□□ 0.46
RDX-209ENST00000530131 WDHD1O75717 1129 aaPredicted RBP17.95■□□□□ 0.46
RDX-209ENST00000530131 SYT1P21579 422 aa17.95■□□□□ 0.46
RDX-209ENST00000530131 IARSP41252 1262 aaKnown RBP17.95■□□□□ 0.46
RDX-209ENST00000530131 KLHL34Q8N239 644 aa17.95■□□□□ 0.46
RDX-209ENST00000530131 NSUN7Q8NE18 718 aaKnown RBP17.95■□□□□ 0.46
RDX-209ENST00000530131 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
RDX-209ENST00000530131 GOLGA8BA8MQT2 603 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 NFKBIEO00221 500 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 JAK2O60674 1132 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 SLC3A2P08195 630 aaKnown RBP17.94■□□□□ 0.46
RDX-209ENST00000530131 CCT2P78371 535 aaKnown RBP17.94■□□□□ 0.46
RDX-209ENST00000530131 SEC23AQ15436 765 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 CDC42EP5Q6NZY7 148 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 MCM4P33991 863 aa17.94■□□□□ 0.46
RDX-209ENST00000530131 PLCD1P51178 756 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms