RNA–Protein interactions for RNA: ENST00000529904.2

SNRNP35-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 4

Gene SNRNP35, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-206ENST00000529904 RFX7Q2KHR2 1363 aa15.31■□□□□ 0.04
SNRNP35-206ENST00000529904 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
SNRNP35-206ENST00000529904 FOXN1O15353 648 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 PPP4CP60510 307 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 MAP3K9P80192 1104 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 CERS3Q8IU89 383 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 ZNF341Q9BYN7 854 aa15.3■□□□□ 0.04
SNRNP35-206ENST00000529904 AK9Q5TCS8 1911 aa15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
SNRNP35-206ENST00000529904 DDTLA6NHG4 134 aaPredicted RBP15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 ERC2O15083 957 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 CA12O43570 354 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 PDE6AP16499 860 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 DYNLL1P63167 89 aaKnown RBP15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 VGLL4Q14135 290 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 TSHZ3Q63HK5 1081 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 SH3BP5LQ7L8J4 393 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 OSBPL5Q9H0X9 879 aaPredicted RBP15.28■□□□□ 0.04
SNRNP35-206ENST00000529904 OTOFQ9HC10 1997 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 ZNF532Q9HCE3 1301 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 MAGEB6P1A0A0J9YX57 407 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 MX1P20591 662 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 SREBF2Q12772 1141 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
SNRNP35-206ENST00000529904 ATRNL1Q5VV63 1379 aa15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 IGHDP01880 384 aa15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 ZSCAN25Q6NSZ9 544 aa15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 MAPKAPK5Q8IW41 473 aa15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 OTUD7AQ8TE49 926 aaPredicted RBP15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 DHX36Q9H2U1 1008 aaKnown RBP15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 COL2A1P02458 1487 aaPredicted RBP15.26■□□□□ 0.03
SNRNP35-206ENST00000529904 FLT1P17948 1338 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 GLRX3O76003 335 aaKnown RBP15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 INPP5BP32019 993 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 ADD2P35612 726 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 USP5P45974 858 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 LBX1P52954 281 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 INHBEP58166 350 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 SMC5Q8IY18 1101 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 SNCAIPQ9Y6H5 919 aa15.25■□□□□ 0.03
SNRNP35-206ENST00000529904 TCRBV5S4A2TA0A5A2 114 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 TRPA1O75762 1119 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 TM4SF4P48230 202 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 RIOK1Q9BRS2 568 aaKnown RBP15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 TRIM34Q9BYJ4 488 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 CRNKL1Q9BZJ0 848 aaKnown RBP15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 RNF186Q9NXI6 227 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 SAGE1Q9NXZ1 904 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 SAP30BPQ9UHR5 308 aaKnown RBP15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 PCNTO95613 3336 aa15.24■□□□□ 0.03
SNRNP35-206ENST00000529904 SPDYE5A6NIY4 337 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 GJA5P36382 358 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 UBE3CQ15386 1083 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 KBTBD3Q8NAB2 608 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 PI4K2BQ8TCG2 481 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 PALD1Q9ULE6 856 aa15.23■□□□□ 0.03
SNRNP35-206ENST00000529904 FOCADQ5VW36 1801 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 PHF20L1A8MW92 1017 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 TBC1D12O60347 775 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 GTF2A2P52657 109 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 LRRFIP1Q32MZ4 808 aaKnown RBP15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 NOL9Q5SY16 702 aaKnown RBP15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 CHD1LQ86WJ1 897 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 HERC5Q9UII4 1024 aaKnown RBP15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 CDK5RAP2Q96SN8 1893 aa15.22■□□□□ 0.03
SNRNP35-206ENST00000529904 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms