RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 ZFPM1Q8IX07 1006 aa15□□□□□ -0.01
USH1C-208ENST00000529563 SCYL3Q8IZE3 742 aa15□□□□□ -0.01
USH1C-208ENST00000529563 FRAT1Q92837 279 aaPredicted RBP15□□□□□ -0.01
USH1C-208ENST00000529563 XAGE2Q96GT9 111 aa15□□□□□ -0.01
USH1C-208ENST00000529563 TRIM47Q96LD4 638 aa15□□□□□ -0.01
USH1C-208ENST00000529563 SRRDQ9UH36 339 aa15□□□□□ -0.01
USH1C-208ENST00000529563 RBBP6Q7Z6E9 1792 aaKnown RBP15□□□□□ -0.01
USH1C-208ENST00000529563 RARSP54136 660 aaKnown RBP14.99□□□□□ -0.01
USH1C-208ENST00000529563 GSTO1P78417 241 aa14.99□□□□□ -0.01
USH1C-208ENST00000529563 HABP4Q5JVS0 413 aaKnown RBP14.99□□□□□ -0.01
USH1C-208ENST00000529563 TRMT2AQ8IZ69 625 aaKnown RBP14.99□□□□□ -0.01
USH1C-208ENST00000529563 SMCR8Q8TEV9 937 aaPredicted RBP14.99□□□□□ -0.01
USH1C-208ENST00000529563 NOL10Q9BSC4 688 aaKnown RBP14.99□□□□□ -0.01
USH1C-208ENST00000529563 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
USH1C-208ENST00000529563 HTTP42858 3142 aa14.99□□□□□ -0.01
USH1C-208ENST00000529563 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 LDHCP07864 332 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 CYP2C8P10632 490 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 OSBPP22059 807 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 GRK4P32298 578 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 UBXN2AP68543 259 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 G3BP1Q13283 466 aaKnown RBP eCLIP14.98□□□□□ -0.01
USH1C-208ENST00000529563 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 ARHGAP45Q92619 1136 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 RAI14Q9P0K7 980 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 MYH2Q9UKX2 1941 aa14.98□□□□□ -0.01
USH1C-208ENST00000529563 GAKO14976 1311 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 PDS5AQ29RF7 1337 aaKnown RBP14.97□□□□□ -0.01
USH1C-208ENST00000529563 TRIM75PA6NK02 468 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 GNAI2P04899 355 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 PTPRAP18433 802 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 MECOMQ03112 1051 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 OS9Q13438 667 aaPredicted RBP14.97□□□□□ -0.01
USH1C-208ENST00000529563 DPF3Q92784 378 aa14.97□□□□□ -0.01
USH1C-208ENST00000529563 ZSWIM8A7E2V4 1837 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 DOCK2Q92608 1830 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.01
USH1C-208ENST00000529563 CTNND1O60716 968 aaKnown RBP14.96□□□□□ -0.01
USH1C-208ENST00000529563 SPATA5Q8NB90 893 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 RNF208Q9H0X6 261 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.01
USH1C-208ENST00000529563 LRP2BPQ9P2M1 347 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
USH1C-208ENST00000529563 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
USH1C-208ENST00000529563 PHF20L1A8MW92 1017 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 PRKCZQ05513 592 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 MTFR1Q15390 333 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 GPAT2Q6NUI2 795 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
USH1C-208ENST00000529563 CLUAP1Q96AJ1 413 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 FAM163AQ96GL9 167 aaPredicted RBP14.95□□□□□ -0.02
USH1C-208ENST00000529563 DDX4Q9NQI0 724 aaKnown RBP14.95□□□□□ -0.02
USH1C-208ENST00000529563 CENPFP49454 3210 aa14.95□□□□□ -0.02
USH1C-208ENST00000529563 TNPO2O14787 897 aaKnown RBP14.94□□□□□ -0.02
USH1C-208ENST00000529563 CCL5P13501 91 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 CTGFP29279 349 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 MOGSQ13724 837 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 TBC1D9Q6ZT07 1266 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 SH3BP5LQ7L8J4 393 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 SLAIN1Q8ND83 568 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 TRIM34Q9BYJ4 488 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 HMG20BQ9P0W2 317 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 PNMA3Q9UL41 463 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 AFG3L2Q9Y4W6 797 aa14.94□□□□□ -0.02
USH1C-208ENST00000529563 ADGRA2Q96PE1 1338 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 GPR75-ASB3A0A0A6YYF3 556 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 UQCRFS1P1P0C7P4 283 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 BCRP11274 1271 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 MTX1Q13505 466 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 TTC39AQ5SRH9 613 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 TEX11Q8IYF3 940 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 HTATIP2Q9BUP3 242 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 SLC45A1Q9Y2W3 748 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 ATRNL1Q5VV63 1379 aa14.93□□□□□ -0.02
USH1C-208ENST00000529563 FAM196BA6NMK8 535 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 H0YGN5 161 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 ZBTB22O15209 634 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 ADCY3O60266 1144 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 BAG3O95817 575 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 MAP4K4O95819 1239 aaPredicted RBP14.92□□□□□ -0.02
USH1C-208ENST00000529563 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 TRIM27P14373 513 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 PABPC4Q13310 644 aaKnown RBP eCLIP14.92□□□□□ -0.02
USH1C-208ENST00000529563 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 PI16Q6UXB8 463 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 CCDC84Q86UT8 332 aaPredicted RBP14.92□□□□□ -0.02
USH1C-208ENST00000529563 COA7Q96BR5 231 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 OSBPL5Q9H0X9 879 aaPredicted RBP14.92□□□□□ -0.02
USH1C-208ENST00000529563 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.92□□□□□ -0.02
USH1C-208ENST00000529563 AGTPBP1Q9UPW5 1226 aa14.92□□□□□ -0.02
USH1C-208ENST00000529563 RFX7Q2KHR2 1363 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 BCAR3O75815 825 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 GJB1P08034 283 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 RHBDL3P58872 404 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 ANKRD13CQ8N6S4 541 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 NSUN4Q96CB9 384 aaKnown RBP14.91□□□□□ -0.02
USH1C-208ENST00000529563 GABRQQ9UN88 632 aa14.91□□□□□ -0.02
USH1C-208ENST00000529563 COLQQ9Y215 455 aaPredicted RBP14.91□□□□□ -0.02
USH1C-208ENST00000529563 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms