RNA–Protein interactions for RNA: ENST00000529552.5

FGFR1-233, Transcript of fibroblast growth factor receptor 1, human

TSL 4

Gene FGFR1, Length 688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-233	ENST00000529552	FAM151A	Q8WW52	585 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	SSH1	Q8WYL5	1049 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	USP44	Q9H0E7	712 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	HDAC5	Q9UQL6	1122 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	HTT	P42858	3142 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	MYH2	Q9UKX2	1941 aa		11.4	□□□□□ -0.58
FGFR1-233	ENST00000529552	BTBD19	C9JJ37	291 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	GTPBP6	O43824	516 aa	Predicted RBP	11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	LDHB	P07195	334 aa	Known RBP	11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	UBTFL1	P0CB47	393 aa	Predicted RBP	11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	LACTB	P83111	547 aa	Predicted RBP	11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	ATP2B3	Q16720	1220 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	ALDH1L2	Q3SY69	923 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	MIGA2	Q7L4E1	593 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	SMC4	Q9NTJ3	1288 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	CEP126	Q9P2H0	1117 aa		11.39	□□□□□ -0.59
FGFR1-233	ENST00000529552	SEMA3E	O15041	775 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	CIAO1	O76071	339 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	MYC	P01106	439 aa	Predicted RBP	11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	HOXD10	P28358	340 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	INPP5B	P32019	993 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	TCP10	Q12799	353 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	HABP4	Q5JVS0	413 aa	Known RBP	11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	ANKRD23	Q86SG2	305 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	ZGPAT	Q8N5A5	531 aa	Known RBP	11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	FBXO22	Q8NEZ5	403 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	SIL1	Q9H173	461 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	OCEL1	Q9H607	264 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	DAGLA	Q9Y4D2	1042 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	MGAM	O43451	1857 aa		11.38	□□□□□ -0.59
FGFR1-233	ENST00000529552	PDHX	O00330	501 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	PLCG2	P16885	1265 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	RFX5	P48382	616 aa	Predicted RBP	11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	IRX5	P78411	483 aa	Predicted RBP	11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	CAP1	Q01518	475 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	DIXDC1	Q155Q3	683 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	CDC42EP5	Q6NZY7	148 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	SH3TC2	Q8TF17	1288 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	PARK7	Q99497	189 aa	Known RBP	11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	ARHGAP39	Q9C0H5	1083 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	DENND2A	Q9ULE3	1009 aa		11.37	□□□□□ -0.59
FGFR1-233	ENST00000529552	SALL1	Q9NSC2	1324 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	DOCK1	Q14185	1865 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	FMNL1	O95466	1100 aa	Predicted RBP	11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	SEC24B	O95487	1268 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	PRDX5	P30044	214 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	NOL9	Q5SY16	702 aa	Known RBP	11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	ATG9A	Q7Z3C6	839 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	SLF2	Q8IX21	1173 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	RAET1E	Q8TD07	263 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	API5	Q9BZZ5	524 aa	Known RBP	11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	USP40	Q9NVE5	1235 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	CPA4	Q9UI42	421 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	METRN	Q9UJH8	293 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	KCNH4	Q9UQ05	1017 aa		11.36	□□□□□ -0.59
FGFR1-233	ENST00000529552	IL15	P40933	162 aa	Predicted RBP	11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	PSMC4	P43686	418 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	SLFN5	Q08AF3	891 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	NFIA	Q12857	509 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	C17orf99	Q6UX52	265 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	DZIP1	Q86YF9	867 aa	Known RBP	11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	NKX2-3	Q8TAU0	364 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	PICK1	Q9NRD5	415 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	ZNF112	Q9UJU3	913 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	PTPRF	P10586	1907 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	MYPN	Q86TC9	1320 aa		11.35	□□□□□ -0.59
FGFR1-233	ENST00000529552	CXCL11	O14625	94 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	ENTPD3	O75355	529 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	CT47B1	P0C2W7	299 aa	Predicted RBP	11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	FCGRT	P55899	365 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	TRIM47	Q96LD4	638 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	BIN2	Q9UBW5	565 aa	Predicted RBP	11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	FAM198A	Q9UFP1	575 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	SRRD	Q9UH36	339 aa		11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	LRRFIP2	Q9Y608	721 aa	Known RBP	11.34	□□□□□ -0.59
FGFR1-233	ENST00000529552	TRIOBP	Q9H2D6	2365 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	OSBP	P22059	807 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	GRK4	P32298	578 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	PHKA1	P46020	1223 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	RGS3	P49796	1198 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	UBXN2A	P68543	259 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	FASTKD5	Q7L8L6	764 aa	Known RBP	11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	SCYL3	Q8IZE3	742 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	ABCF2	Q9UG63	623 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	PDS5A	Q29RF7	1337 aa	Known RBP	11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	ADGRA2	Q96PE1	1338 aa		11.33	□□□□□ -0.6
FGFR1-233	ENST00000529552	CENPF	P49454	3210 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	CCDC102B	Q68D86	513 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	GADL1	Q6ZQY3	521 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	PDCD7	Q8N8D1	485 aa	Known RBP	11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	IDI2	Q9BXS1	227 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	COPRS	Q9NQ92	184 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	NOB1	Q9ULX3	412 aa	Known RBP	11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	AKAP2	Q9Y2D5	859 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	ZHX2	Q9Y6X8	837 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	ATAD5	Q96QE3	1844 aa		11.32	□□□□□ -0.6
FGFR1-233	ENST00000529552	GAK	O14976	1311 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms