RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PUS7LQ9H0K6 701 aaKnown RBP16.89■□□□□ 0.29
USF1-209ENST00000529476 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 MBD4O95243 580 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 PLCG2P16885 1265 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 TCP10Q12799 353 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 TNFAIP1Q13829 316 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 RASA3Q14644 834 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 PRAMEF18Q5VWM3 479 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 LCORLQ8N3X6 602 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 IDI2Q9BXS1 227 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 ARMT1Q9H993 441 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
USF1-209ENST00000529476 FAM198AQ9UFP1 575 aa16.88■□□□□ 0.29
USF1-209ENST00000529476 M0R2C6 588 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 TNNI2P48788 182 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 GRM1Q13255 1194 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 PICALMQ13492 652 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 ZFPM1Q8IX07 1006 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 FAM227BQ96M60 508 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
USF1-209ENST00000529476 BEGAINQ9BUH8 593 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 MCOLN1Q9GZU1 580 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 TMEM39BQ9GZU3 492 aa16.87■□□□□ 0.29
USF1-209ENST00000529476 TRPM7Q96QT4 1865 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 NMIQ13287 307 aaPredicted RBP16.86■□□□□ 0.29
USF1-209ENST00000529476 BMP2KLQ5H9B9 411 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
USF1-209ENST00000529476 FAM83AQ86UY5 434 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 CERS3Q8IU89 383 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 TGFBRAP1Q8WUH2 860 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 CDCA5Q96FF9 252 aa16.86■□□□□ 0.29
USF1-209ENST00000529476 A0A0D9SFI3 127 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 ENTPD3O75355 529 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 MAPKAPK5Q8IW41 473 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 FAM151AQ8WW52 585 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 TEPSINQ96N21 525 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
USF1-209ENST00000529476 DIAPH3Q9NSV4 1193 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
USF1-209ENST00000529476 NAV1Q8NEY1 1877 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 MYH1P12882 1939 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 GPAA1O43292 621 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 PRKAB2O43741 272 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 AOC2O75106 756 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 NPM3O75607 178 aaKnown RBP16.84■□□□□ 0.29
USF1-209ENST00000529476 USP5P45974 858 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 CCDC129Q6ZRS4 1044 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 STRBPQ96SI9 672 aaKnown RBP16.84■□□□□ 0.29
USF1-209ENST00000529476 ZNF408Q9H9D4 720 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 HELLSQ9NRZ9 838 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 FLT1P17948 1338 aa16.84■□□□□ 0.29
USF1-209ENST00000529476 HIP1O00291 1037 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 TNRC18O15417 2968 aaPredicted RBP16.83■□□□□ 0.28
USF1-209ENST00000529476 ECE1P42892 770 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 NBPF12Q5TAG4 269 aaPredicted RBP16.83■□□□□ 0.28
USF1-209ENST00000529476 CST9Q5W186 159 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 CWC27Q6UX04 472 aaKnown RBP16.83■□□□□ 0.28
USF1-209ENST00000529476 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 OSBPL5Q9H0X9 879 aaPredicted RBP16.83■□□□□ 0.28
USF1-209ENST00000529476 BAZ2AQ9UIF9 1905 aaKnown RBP16.83■□□□□ 0.28
USF1-209ENST00000529476 SLC4A4Q9Y6R1 1079 aa16.83■□□□□ 0.28
USF1-209ENST00000529476 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
USF1-209ENST00000529476 SSC5DA1L4H1 1573 aa16.82■□□□□ 0.28
USF1-209ENST00000529476 RPAP1Q9BWH6 1393 aaPredicted RBP16.82■□□□□ 0.28
USF1-209ENST00000529476 DDTLA6NHG4 134 aaPredicted RBP16.82■□□□□ 0.28
USF1-209ENST00000529476 CHMLP26374 656 aa16.82■□□□□ 0.28
USF1-209ENST00000529476 MCMDC2Q4G0Z9 681 aa16.82■□□□□ 0.28
USF1-209ENST00000529476 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
USF1-209ENST00000529476 CASP8AP2Q9UKL3 1982 aa16.81■□□□□ 0.28
USF1-209ENST00000529476 CELF2O95319 508 aaKnown RBP16.81■□□□□ 0.28
USF1-209ENST00000529476 ZNF589Q86UQ0 364 aaPredicted RBP16.81■□□□□ 0.28
USF1-209ENST00000529476 ZSCAN29Q8IWY8 852 aaPredicted RBP16.81■□□□□ 0.28
USF1-209ENST00000529476 DCP1AQ9NPI6 582 aaPredicted RBP16.81■□□□□ 0.28
USF1-209ENST00000529476 COL2A1P02458 1487 aaPredicted RBP16.8■□□□□ 0.28
USF1-209ENST00000529476 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 SLC4A8Q2Y0W8 1093 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 SUPT20HL1Q3ZLR7 823 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 IL25Q9H293 177 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 PALD1Q9ULE6 856 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 FZD1Q9UP38 647 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 TLL2Q9Y6L7 1015 aa16.8■□□□□ 0.28
USF1-209ENST00000529476 CCDC171Q6TFL3 1326 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 GNAT2P19087 354 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 NF2P35240 595 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 MAP2K2P36507 400 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 DGKZQ13574 1117 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 PRKG1Q13976 671 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 VPS53Q5VIR6 699 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 CSRNP1Q96S65 589 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
USF1-209ENST00000529476 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms