RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 ZNF112Q9UJU3 913 aa20.47■□□□□ 0.87
HIF3A-211ENST00000528563 DDTLA6NHG4 134 aaPredicted RBP20.46■□□□□ 0.87
HIF3A-211ENST00000528563 CA12O43570 354 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 TM4SF4P48230 202 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 PICALMQ13492 652 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 TEX11Q8IYF3 940 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 WNK4Q96J92 1243 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 ZNF341Q9BYN7 854 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 PAG1Q9NWQ8 432 aa20.46■□□□□ 0.87
HIF3A-211ENST00000528563 ZBTB48P10074 688 aaPredicted RBP20.45■□□□□ 0.86
HIF3A-211ENST00000528563 MKRN3Q13064 507 aaKnown RBP20.45■□□□□ 0.86
HIF3A-211ENST00000528563 VGLL4Q14135 290 aa20.45■□□□□ 0.86
HIF3A-211ENST00000528563 SLC9C2Q5TAH2 1124 aa20.45■□□□□ 0.86
HIF3A-211ENST00000528563 GCC1Q96CN9 775 aa20.45■□□□□ 0.86
HIF3A-211ENST00000528563 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.45■□□□□ 0.86
HIF3A-211ENST00000528563 ATRNL1Q5VV63 1379 aa20.45■□□□□ 0.86
HIF3A-211ENST00000528563 AK9Q5TCS8 1911 aa20.45■□□□□ 0.86
HIF3A-211ENST00000528563 HSPA8P11142 646 aaKnown RBP20.44■□□□□ 0.86
HIF3A-211ENST00000528563 GJA5P36382 358 aa20.44■□□□□ 0.86
HIF3A-211ENST00000528563 DYNLL1P63167 89 aaKnown RBP20.44■□□□□ 0.86
HIF3A-211ENST00000528563 ZSCAN29Q8IWY8 852 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-211ENST00000528563 ZKSCAN4Q969J2 545 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-211ENST00000528563 WRNIP1Q96S55 665 aa20.44■□□□□ 0.86
HIF3A-211ENST00000528563 ELP3Q9H9T3 547 aa20.44■□□□□ 0.86
HIF3A-211ENST00000528563 DOCK2Q92608 1830 aa20.44■□□□□ 0.86
HIF3A-211ENST00000528563 MAST2Q6P0Q8 1798 aa20.44■□□□□ 0.86
HIF3A-211ENST00000528563 PDE6AP16499 860 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 LBX1P52954 281 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
HIF3A-211ENST00000528563 RWDD1Q9H446 243 aaPredicted RBP20.43■□□□□ 0.86
HIF3A-211ENST00000528563 RNF186Q9NXI6 227 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 CSADQ9Y600 493 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 PHF20L1A8MW92 1017 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 INPP5BP32019 993 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 ANKRD45Q5TZF3 282 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 CERS3Q8IU89 383 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 MIGA1Q8NAN2 632 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 TGFBRAP1Q8WUH2 860 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 PRDM10Q9NQV6 1147 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 SNCAIPQ9Y6H5 919 aa20.43■□□□□ 0.86
HIF3A-211ENST00000528563 OTOFQ9HC10 1997 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 TCRBV5S4A2TA0A5A2 114 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 IGHDP01880 384 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 INHBEP58166 350 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 COL13A1Q5TAT6 717 aaPredicted RBP20.42■□□□□ 0.86
HIF3A-211ENST00000528563 OTUD7AQ8TE49 926 aaPredicted RBP20.42■□□□□ 0.86
HIF3A-211ENST00000528563 CNKSR2Q8WXI2 1034 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 OPTNQ96CV9 577 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 GPATCH3Q96I76 525 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 SAGE1Q9NXZ1 904 aa20.42■□□□□ 0.86
HIF3A-211ENST00000528563 COL2A1P02458 1487 aaPredicted RBP20.41■□□□□ 0.86
HIF3A-211ENST00000528563 MANSC4A6NHS7 340 aaPredicted RBP20.41■□□□□ 0.86
HIF3A-211ENST00000528563 TBC1D12O60347 775 aa20.41■□□□□ 0.86
HIF3A-211ENST00000528563 TRPA1O75762 1119 aa20.41■□□□□ 0.86
HIF3A-211ENST00000528563 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
HIF3A-211ENST00000528563 RIOK1Q9BRS2 568 aaKnown RBP20.41■□□□□ 0.86
HIF3A-211ENST00000528563 TSKSQ9UJT2 592 aa20.41■□□□□ 0.86
HIF3A-211ENST00000528563 TTC41PQ6P2S7 1318 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 ZNF532Q9HCE3 1301 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 SPDYE5A6NIY4 337 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 SLURP2P0DP57 97 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 SREBF2Q12772 1141 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 TSHZ3Q63HK5 1081 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 ERO1BQ86YB8 467 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 MAPKAPK5Q8IW41 473 aa20.4■□□□□ 0.86
HIF3A-211ENST00000528563 DHX36Q9H2U1 1008 aaKnown RBP20.4■□□□□ 0.86
HIF3A-211ENST00000528563 NOL9Q5SY16 702 aaKnown RBP20.39■□□□□ 0.85
HIF3A-211ENST00000528563 MS4A4AQ96JQ5 239 aa20.39■□□□□ 0.85
HIF3A-211ENST00000528563 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.39■□□□□ 0.85
HIF3A-211ENST00000528563 FLT1P17948 1338 aa20.39■□□□□ 0.85
HIF3A-211ENST00000528563 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.85
HIF3A-211ENST00000528563 MAGEB6P1A0A0J9YX57 407 aa20.38■□□□□ 0.85
HIF3A-211ENST00000528563 TESPA1A2RU30 521 aaPredicted RBP20.38■□□□□ 0.85
HIF3A-211ENST00000528563 ADD2P35612 726 aa20.38■□□□□ 0.85
HIF3A-211ENST00000528563 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
HIF3A-211ENST00000528563 PI4KBQ9UBF8 816 aa20.38■□□□□ 0.85
HIF3A-211ENST00000528563 UBE3CQ15386 1083 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 SLFNL1Q499Z3 407 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 PI4K2BQ8TCG2 481 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 OTUD5Q96G74 571 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 ZBTB47Q9UFB7 747 aaPredicted RBP20.37■□□□□ 0.85
HIF3A-211ENST00000528563 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 CDK5RAP2Q96SN8 1893 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 ERC2O15083 957 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 CTNND1O60716 968 aaKnown RBP20.37■□□□□ 0.85
HIF3A-211ENST00000528563 MX1P20591 662 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 PPATQ06203 517 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 METTL16Q86W50 562 aaKnown RBP20.37■□□□□ 0.85
HIF3A-211ENST00000528563 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 FOXP4Q8IVH2 680 aaPredicted RBP20.37■□□□□ 0.85
HIF3A-211ENST00000528563 PTPN18Q99952 460 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.37■□□□□ 0.85
HIF3A-211ENST00000528563 STAP2Q9UGK3 403 aa20.37■□□□□ 0.85
HIF3A-211ENST00000528563 IRF6O14896 467 aa20.36■□□□□ 0.85
HIF3A-211ENST00000528563 GLRX3O76003 335 aaKnown RBP20.36■□□□□ 0.85
HIF3A-211ENST00000528563 CHGBP05060 677 aa20.36■□□□□ 0.85
HIF3A-211ENST00000528563 USP5P45974 858 aa20.36■□□□□ 0.85
HIF3A-211ENST00000528563 GTF2A2P52657 109 aa20.36■□□□□ 0.85
HIF3A-211ENST00000528563 PPIL2Q13356 520 aa20.36■□□□□ 0.85
HIF3A-211ENST00000528563 KBTBD3Q8NAB2 608 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms