RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 DDTLA6NHG4 134 aaPredicted RBP21.5■■□□□ 1.03
NXF1-206ENST00000527902 UBE2Q2LH0YL09 131 aa21.5■■□□□ 1.03
NXF1-206ENST00000527902 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
NXF1-206ENST00000527902 PLCG2P16885 1265 aa21.5■■□□□ 1.03
NXF1-206ENST00000527902 TTLL12Q14166 644 aaPredicted RBP21.5■■□□□ 1.03
NXF1-206ENST00000527902 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
NXF1-206ENST00000527902 LCORLQ8N3X6 602 aa21.5■■□□□ 1.03
NXF1-206ENST00000527902 TGFBRAP1Q8WUH2 860 aa21.5■■□□□ 1.03
NXF1-206ENST00000527902 COL2A1P02458 1487 aaPredicted RBP21.5■■□□□ 1.03
NXF1-206ENST00000527902 BAZ2AQ9UIF9 1905 aaKnown RBP21.49■■□□□ 1.03
NXF1-206ENST00000527902 USP2O75604 605 aaPredicted RBP21.49■■□□□ 1.03
NXF1-206ENST00000527902 SLURP2P0DP57 97 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 DEFB115Q30KQ5 88 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 ZSCAN25Q6NSZ9 544 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 MAPKAPK5Q8IW41 473 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 CCDC136Q96JN2 1154 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 FSD1Q9BTV5 496 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 PUS7LQ9H0K6 701 aaKnown RBP21.49■■□□□ 1.03
NXF1-206ENST00000527902 OSBPL5Q9H0X9 879 aaPredicted RBP21.49■■□□□ 1.03
NXF1-206ENST00000527902 ARMT1Q9H993 441 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 ANGEL1Q9UNK9 670 aaKnown RBP21.49■■□□□ 1.03
NXF1-206ENST00000527902 FLT1P17948 1338 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 PCNTO95613 3336 aa21.49■■□□□ 1.03
NXF1-206ENST00000527902 RNF113AO15541 343 aaKnown RBP21.48■■□□□ 1.03
NXF1-206ENST00000527902 MBD4O95243 580 aa21.48■■□□□ 1.03
NXF1-206ENST00000527902 MAP3K11Q16584 847 aa21.48■■□□□ 1.03
NXF1-206ENST00000527902 EVI5LQ96CN4 794 aa21.48■■□□□ 1.03
NXF1-206ENST00000527902 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 LDLRAD1Q5T700 205 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 CYP4F22Q6NT55 531 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 OSBP2Q969R2 916 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 KLRG1Q96E93 195 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 HHIPL1Q96JK4 782 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 CSRNP1Q96S65 589 aa21.47■■□□□ 1.03
NXF1-206ENST00000527902 PPP1R12BO60237 982 aaPredicted RBP21.46■■□□□ 1.03
NXF1-206ENST00000527902 VEGFBP49765 207 aa21.46■■□□□ 1.03
NXF1-206ENST00000527902 ARMC9Q7Z3E5 817 aa21.46■■□□□ 1.03
NXF1-206ENST00000527902 CERS3Q8IU89 383 aa21.46■■□□□ 1.03
NXF1-206ENST00000527902 ZSCAN29Q8IWY8 852 aaPredicted RBP21.46■■□□□ 1.03
NXF1-206ENST00000527902 APPBP2Q92624 585 aa21.46■■□□□ 1.03
NXF1-206ENST00000527902 M0R2C6 588 aa21.45■■□□□ 1.02
NXF1-206ENST00000527902 PRKAB2O43741 272 aa21.45■■□□□ 1.02
NXF1-206ENST00000527902 ZFYP08048 801 aaPredicted RBP21.45■■□□□ 1.02
NXF1-206ENST00000527902 GSPT1P15170 499 aaKnown RBP21.45■■□□□ 1.02
NXF1-206ENST00000527902 RGMBQ6NW40 437 aa21.45■■□□□ 1.02
NXF1-206ENST00000527902 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.02
NXF1-206ENST00000527902 SDR42E1Q8WUS8 393 aa21.45■■□□□ 1.02
NXF1-206ENST00000527902 CLMNQ96JQ2 1002 aa21.45■■□□□ 1.02
NXF1-206ENST00000527902 SEC62Q99442 399 aaKnown RBP21.45■■□□□ 1.02
NXF1-206ENST00000527902 SAP30BPQ9UHR5 308 aaKnown RBP21.45■■□□□ 1.02
NXF1-206ENST00000527902 TRIM6-TRIM34B2RNG4 842 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 USP5P45974 858 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 ZMYM1Q5SVZ6 1142 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 TTC22Q5TAA0 569 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 ERICH6BQ5W0A0 696 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.44■■□□□ 1.025e-8■□□□□ 10.3
NXF1-206ENST00000527902 CAPNS2Q96L46 248 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
NXF1-206ENST00000527902 PALD1Q9ULE6 856 aa21.44■■□□□ 1.02
NXF1-206ENST00000527902 FAM155AB1AL88 458 aaPredicted RBP21.43■■□□□ 1.02
NXF1-206ENST00000527902 IREB2P48200 963 aaKnown RBP21.43■■□□□ 1.02
NXF1-206ENST00000527902 GRM1Q13255 1194 aa21.43■■□□□ 1.02
NXF1-206ENST00000527902 SLC4A8Q2Y0W8 1093 aa21.43■■□□□ 1.02
NXF1-206ENST00000527902 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.43■■□□□ 1.02
NXF1-206ENST00000527902 RILPL2Q969X0 211 aa21.43■■□□□ 1.02
NXF1-206ENST00000527902 AIDAQ96BJ3 306 aa21.43■■□□□ 1.02
NXF1-206ENST00000527902 FAM196BA6NMK8 535 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 ZNF157P51786 506 aaPredicted RBP21.42■■□□□ 1.02
NXF1-206ENST00000527902 MAP3K10Q02779 954 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 DCAF15Q66K64 600 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 RASAL3Q86YV0 1011 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 HOOK2Q96ED9 719 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 ATAD5Q96QE3 1844 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 STRBPQ96SI9 672 aaKnown RBP21.42■■□□□ 1.02
NXF1-206ENST00000527902 WDR33Q9C0J8 1336 aaKnown RBP21.42■■□□□ 1.02
NXF1-206ENST00000527902 PPP4R2Q9NY27 417 aa21.42■■□□□ 1.02
NXF1-206ENST00000527902 LAMB1P07942 1786 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 AOC2O75106 756 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 EVX2Q03828 476 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 LRRFIP1Q32MZ4 808 aaKnown RBP21.41■■□□□ 1.02
NXF1-206ENST00000527902 WRNIP1Q96S55 665 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 ZIC5Q96T25 663 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
NXF1-206ENST00000527902 ZNF112Q9UJU3 913 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 DOCK1Q14185 1865 aa21.41■■□□□ 1.02
NXF1-206ENST00000527902 PHF20L1A8MW92 1017 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 GPAA1O43292 621 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 SLC10A3P09131 477 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 INPP5BP32019 993 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 VGLL4Q14135 290 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 ANKRD13AQ8IZ07 590 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 ZKSCAN4Q969J2 545 aaPredicted RBP21.4■■□□□ 1.02
NXF1-206ENST00000527902 FAM227BQ96M60 508 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
NXF1-206ENST00000527902 DNAJC18Q9H819 358 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.4■■□□□ 1.02
NXF1-206ENST00000527902 SLC4A4Q9Y6R1 1079 aa21.4■■□□□ 1.02
NXF1-206ENST00000527902 A0A0D9SFI3 127 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms