RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 SNCAIPQ9Y6H5 919 aa22.16■■□□□ 1.14
TRIM3-205ENST00000527237 DDTLA6NHG4 134 aaPredicted RBP22.15■■□□□ 1.14
TRIM3-205ENST00000527237 LDHCP07864 332 aa22.15■■□□□ 1.14
TRIM3-205ENST00000527237 IFIT2P09913 472 aaKnown RBP22.15■■□□□ 1.14
TRIM3-205ENST00000527237 ZKSCAN4Q969J2 545 aaPredicted RBP22.15■■□□□ 1.14
TRIM3-205ENST00000527237 OPTNQ96CV9 577 aa22.15■■□□□ 1.14
TRIM3-205ENST00000527237 AATFQ9NY61 560 aaKnown RBP eCLIP22.15■■□□□ 1.14
TRIM3-205ENST00000527237 ENTPD3O75355 529 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 IDH1O75874 414 aaKnown RBP22.14■■□□□ 1.13
TRIM3-205ENST00000527237 INPP5BP32019 993 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 MAP3K9P80192 1104 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 TNS4Q8IZW8 715 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 SH3RF3Q8TEJ3 882 aaPredicted RBP22.14■■□□□ 1.13
TRIM3-205ENST00000527237 LRRCC1Q9C099 1032 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 ZSWIM8A7E2V4 1837 aa22.14■■□□□ 1.13
TRIM3-205ENST00000527237 UNCXA6NJT0 531 aa22.13■■□□□ 1.13
TRIM3-205ENST00000527237 ZBTB48P10074 688 aaPredicted RBP22.13■■□□□ 1.13
TRIM3-205ENST00000527237 DCAF15Q66K64 600 aa22.13■■□□□ 1.13
TRIM3-205ENST00000527237 EDC3Q96F86 508 aaKnown RBP22.13■■□□□ 1.13
TRIM3-205ENST00000527237 ZNF341Q9BYN7 854 aa22.13■■□□□ 1.13
TRIM3-205ENST00000527237 SAGE1Q9NXZ1 904 aa22.13■■□□□ 1.13
TRIM3-205ENST00000527237 COL2A1P02458 1487 aaPredicted RBP22.13■■□□□ 1.13
TRIM3-205ENST00000527237 TM4SF4P48230 202 aa22.12■■□□□ 1.13
TRIM3-205ENST00000527237 DYNLL1P63167 89 aaKnown RBP22.12■■□□□ 1.13
TRIM3-205ENST00000527237 DNAJC2Q99543 621 aaKnown RBP22.12■■□□□ 1.13
TRIM3-205ENST00000527237 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
TRIM3-205ENST00000527237 CSADQ9Y600 493 aa22.12■■□□□ 1.13
TRIM3-205ENST00000527237 CYP7A1P22680 504 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 SREBF2Q12772 1141 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 ZSCAN29Q8IWY8 852 aaPredicted RBP22.11■■□□□ 1.13
TRIM3-205ENST00000527237 TEX11Q8IYF3 940 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 REM2Q8IYK8 340 aaPredicted RBP22.11■■□□□ 1.13
TRIM3-205ENST00000527237 MAGEB6Q8N7X4 407 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 OTUD5Q96G74 571 aa22.11■■□□□ 1.13
TRIM3-205ENST00000527237 MANSC4A6NHS7 340 aaPredicted RBP22.1■■□□□ 1.13
TRIM3-205ENST00000527237 FAM196BA6NMK8 535 aa22.1■■□□□ 1.13
TRIM3-205ENST00000527237 IGF2BP3O00425 579 aaKnown RBP eCLIP22.1■■□□□ 1.13
TRIM3-205ENST00000527237 SPDYE5A6NIY4 337 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 GOLIM4O00461 696 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 TBC1D8O95759 1140 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 MIGA1Q8NAN2 632 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.09■■□□□ 1.13
TRIM3-205ENST00000527237 NOL10Q9BSC4 688 aaKnown RBP22.09■■□□□ 1.13
TRIM3-205ENST00000527237 OSBPL5Q9H0X9 879 aaPredicted RBP22.09■■□□□ 1.13
TRIM3-205ENST00000527237 BOLA2Q9H3K6 86 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 R3HDMLQ9H3Y0 253 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 ZNF112Q9UJU3 913 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 LOC285556D6RIA3 1793 aa22.09■■□□□ 1.13
TRIM3-205ENST00000527237 IFNL1Q8IU54 200 aa22.08■■□□□ 1.13
TRIM3-205ENST00000527237 FLT1P17948 1338 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 NPM3O75607 178 aaKnown RBP22.07■■□□□ 1.12
TRIM3-205ENST00000527237 PPP4CP60510 307 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 TSHZ3Q63HK5 1081 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 MAPKAPK5Q8IW41 473 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 MS4A4AQ96JQ5 239 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 PTPN18Q99952 460 aa22.07■■□□□ 1.12
TRIM3-205ENST00000527237 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.07■■□□□ 1.12
TRIM3-205ENST00000527237 PHF20L1A8MW92 1017 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 BAG3O95817 575 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
TRIM3-205ENST00000527237 ATP5JP18859 108 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 MAP3K12Q12852 859 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 SLFNL1Q499Z3 407 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 IFFO2Q5TF58 517 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 TGFBRAP1Q8WUH2 860 aa22.06■■□□□ 1.12
TRIM3-205ENST00000527237 CHGBP05060 677 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 PDE6AP16499 860 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 SLC4A8Q2Y0W8 1093 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 NOL9Q5SY16 702 aaKnown RBP22.05■■□□□ 1.12
TRIM3-205ENST00000527237 ERO1BQ86YB8 467 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 BRI3BPQ8WY22 251 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 PAG1Q9NWQ8 432 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 MGAMO43451 1857 aa22.05■■□□□ 1.12
TRIM3-205ENST00000527237 TESPA1A2RU30 521 aaPredicted RBP22.04■■□□□ 1.12
TRIM3-205ENST00000527237 IRF6O14896 467 aa22.04■■□□□ 1.12
TRIM3-205ENST00000527237 PLCG2P16885 1265 aa22.04■■□□□ 1.12
TRIM3-205ENST00000527237 MAP3K10Q02779 954 aa22.04■■□□□ 1.12
TRIM3-205ENST00000527237 TTF1Q15361 905 aaPredicted RBP22.04■■□□□ 1.12
TRIM3-205ENST00000527237 HAUS7Q99871 368 aa22.04■■□□□ 1.12
TRIM3-205ENST00000527237 CCL15-CCL14A0A0B4J2E2 113 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 TCRBV5S4A2TA0A5A2 114 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 IGSF3O75054 1194 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 PPIL2Q13356 520 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 CCL15Q16663 113 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 CCDC84Q86UT8 332 aaPredicted RBP22.03■■□□□ 1.12
TRIM3-205ENST00000527237 EXOC6Q8TAG9 804 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 OTUD7AQ8TE49 926 aaPredicted RBP22.03■■□□□ 1.12
TRIM3-205ENST00000527237 SAP30BPQ9UHR5 308 aaKnown RBP22.03■■□□□ 1.12
TRIM3-205ENST00000527237 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
TRIM3-205ENST00000527237 ZNF532Q9HCE3 1301 aa22.03■■□□□ 1.12
TRIM3-205ENST00000527237 RRP1BQ14684 758 aaKnown RBP22.02■■□□□ 1.12
TRIM3-205ENST00000527237 SLC9C2Q5TAH2 1124 aa22.02■■□□□ 1.12
TRIM3-205ENST00000527237 RIOK1Q9BRS2 568 aaKnown RBP22.02■■□□□ 1.12
TRIM3-205ENST00000527237 CAPN15O75808 1086 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 GTF2A2P52657 109 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 INHBEP58166 350 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 SCYL3Q8IZE3 742 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 FAM43AQ8N2R8 423 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 ZNF296Q8WUU4 475 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms