RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 PDS5AQ29RF7 1337 aaKnown RBP23.42■■□□□ 1.34
PKP3-204ENST00000526971 MYCP01106 439 aaPredicted RBP23.42■■□□□ 1.34
PKP3-204ENST00000526971 LACTBP83111 547 aaPredicted RBP23.42■■□□□ 1.34
PKP3-204ENST00000526971 SNAPC2Q13487 334 aa23.42■■□□□ 1.34
PKP3-204ENST00000526971 DIXDC1Q155Q3 683 aa23.42■■□□□ 1.34
PKP3-204ENST00000526971 SH3TC2Q8TF17 1288 aa23.42■■□□□ 1.34
PKP3-204ENST00000526971 ZCCHC17Q9NP64 241 aaKnown RBP23.42■■□□□ 1.34
PKP3-204ENST00000526971 DAGLAQ9Y4D2 1042 aa23.42■■□□□ 1.34
PKP3-204ENST00000526971 MGAMO43451 1857 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 CTGFP29279 349 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 PRDX5P30044 214 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 NFIAQ12857 509 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 DCAF15Q66K64 600 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 DBNDD2Q9BQY9 259 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 TMEM106CQ9BVX2 250 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 ZNF341Q9BYN7 854 aa23.41■■□□□ 1.34
PKP3-204ENST00000526971 ADGRA2Q96PE1 1338 aa23.4■■□□□ 1.34
PKP3-204ENST00000526971 PTPRFP10586 1907 aa23.4■■□□□ 1.34
PKP3-204ENST00000526971 ECM2O94769 699 aaPredicted RBP23.4■■□□□ 1.34
PKP3-204ENST00000526971 ARID4AP29374 1257 aaPredicted RBP23.4■■□□□ 1.34
PKP3-204ENST00000526971 CDC42EP5Q6NZY7 148 aa23.4■■□□□ 1.34
PKP3-204ENST00000526971 EAF2Q96CJ1 260 aaPredicted RBP23.4■■□□□ 1.34
PKP3-204ENST00000526971 HOOK2Q96ED9 719 aa23.4■■□□□ 1.34
PKP3-204ENST00000526971 UQCRFS1P1P0C7P4 283 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 TCP10Q12799 353 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 ARHGEF6Q15052 776 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 ZGPATQ8N5A5 531 aaKnown RBP23.39■■□□□ 1.33
PKP3-204ENST00000526971 RHPN1Q8TCX5 695 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 FAM151AQ8WW52 585 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 HMG20BQ9P0W2 317 aa23.39■■□□□ 1.33
PKP3-204ENST00000526971 LDHBP07195 334 aaKnown RBP23.38■■□□□ 1.33
PKP3-204ENST00000526971 PPATQ06203 517 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 MOGSQ13724 837 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 CCDC158Q5M9N0 1113 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 C17orf99Q6UX52 265 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 NBPF11Q86T75 865 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 SPATA5Q8NB90 893 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 CCDC8Q9H0W5 538 aaPredicted RBP23.38■■□□□ 1.33
PKP3-204ENST00000526971 FAM198AQ9UFP1 575 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 CPA4Q9UI42 421 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 ZNF112Q9UJU3 913 aa23.38■■□□□ 1.33
PKP3-204ENST00000526971 DBNLQ9UJU6 430 aaKnown RBP23.38■■□□□ 1.33
PKP3-204ENST00000526971 TRIOBPQ9H2D6 2365 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 RAB11FIP3O75154 756 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 SLC4A8Q2Y0W8 1093 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 TTC39AQ5SRH9 613 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 KIF1BPQ96EK5 621 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 TLR7Q9NYK1 1049 aaKnown RBP23.37■■□□□ 1.33
PKP3-204ENST00000526971 KCNH4Q9UQ05 1017 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 PHIPQ8WWQ0 1821 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 ATRNL1Q5VV63 1379 aa23.37■■□□□ 1.33
PKP3-204ENST00000526971 ZFPM1Q8IX07 1006 aa23.36■■□□□ 1.33
PKP3-204ENST00000526971 ZNF512BQ96KM6 892 aaPredicted RBP23.36■■□□□ 1.33
PKP3-204ENST00000526971 CRBNQ96SW2 442 aa23.36■■□□□ 1.33
PKP3-204ENST00000526971 IL1RAPL2Q9NP60 686 aa23.36■■□□□ 1.33
PKP3-204ENST00000526971 APBB1O00213 710 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 WDHD1O75717 1129 aaPredicted RBP23.35■■□□□ 1.33
PKP3-204ENST00000526971 MCAMP43121 646 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 KIF22Q14807 665 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 SPTY2D1Q68D10 685 aaPredicted RBP23.35■■□□□ 1.33
PKP3-204ENST00000526971 PI16Q6UXB8 463 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 ANKRD23Q86SG2 305 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 AACSQ86V21 672 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 TRIM47Q96LD4 638 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 ABCF2Q9UG63 623 aa23.35■■□□□ 1.33
PKP3-204ENST00000526971 DOCK1Q14185 1865 aa23.34■■□□□ 1.33
PKP3-204ENST00000526971 PDHXO00330 501 aa23.34■■□□□ 1.33
PKP3-204ENST00000526971 NOL9Q5SY16 702 aaKnown RBP23.34■■□□□ 1.33
PKP3-204ENST00000526971 SHISA4Q96DD7 197 aa23.34■■□□□ 1.33
PKP3-204ENST00000526971 RFX7Q2KHR2 1363 aa23.34■■□□□ 1.33
PKP3-204ENST00000526971 MTFR1Q15390 333 aa23.33■■□□□ 1.33
PKP3-204ENST00000526971 CLASRPQ8N2M8 674 aaKnown RBP23.33■■□□□ 1.33
PKP3-204ENST00000526971 USP40Q9NVE5 1235 aa23.33■■□□□ 1.33
PKP3-204ENST00000526971 PCDHB15Q9Y5E8 787 aa23.33■■□□□ 1.33
PKP3-204ENST00000526971 GNRH1P01148 92 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 PSMC4P43686 418 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 FXR1P51114 621 aaKnown RBP eCLIP23.32■■□□□ 1.32
PKP3-204ENST00000526971 TBC1D9Q6ZT07 1266 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 DZIP1Q86YF9 867 aaKnown RBP23.32■■□□□ 1.32
PKP3-204ENST00000526971 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
PKP3-204ENST00000526971 SLURP2P0DP57 97 aa23.31■■□□□ 1.32
PKP3-204ENST00000526971 OSBPP22059 807 aa23.31■■□□□ 1.32
PKP3-204ENST00000526971 GPAT2Q6NUI2 795 aa23.31■■□□□ 1.32
PKP3-204ENST00000526971 PRMT2P55345 433 aa23.3■■□□□ 1.32
PKP3-204ENST00000526971 SLF2Q8IX21 1173 aa23.3■■□□□ 1.32
PKP3-204ENST00000526971 DCTPP1Q9H773 170 aa23.3■■□□□ 1.32
PKP3-204ENST00000526971 COLQQ9Y215 455 aaPredicted RBP23.3■■□□□ 1.32
PKP3-204ENST00000526971 GAKO14976 1311 aa23.3■■□□□ 1.32
PKP3-204ENST00000526971 DOCK3Q8IZD9 2030 aa23.3■■□□□ 1.32
PKP3-204ENST00000526971 PHF20L1A8MW92 1017 aa23.29■■□□□ 1.32
PKP3-204ENST00000526971 RGS3P49796 1198 aa23.29■■□□□ 1.32
PKP3-204ENST00000526971 MECOMQ03112 1051 aa23.29■■□□□ 1.32
PKP3-204ENST00000526971 SH3BP5LQ7L8J4 393 aa23.29■■□□□ 1.32
PKP3-204ENST00000526971 FAM163AQ96GL9 167 aaPredicted RBP23.29■■□□□ 1.32
PKP3-204ENST00000526971 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
PKP3-204ENST00000526971 CYP2C8P10632 490 aa23.28■■□□□ 1.32
PKP3-204ENST00000526971 BCRP11274 1271 aa23.28■■□□□ 1.32
PKP3-204ENST00000526971 LRRCC1Q9C099 1032 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms